| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0990 |
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| Symbol | |
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| ID | 5134433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 965058 |
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| End bp | 965732 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531312 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001215826 |
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| Protein GI | 147672355 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000166767 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATCT TATTGATTGA AGATGATGAA AGAATTGCCC GTTTTATTGA GCGAGGCTTA
AAAGCGGAAG GGCACCAAAT CCACCGTTTG AAAGATGGTC AATACGGATT AGAAACCGTG
AAAAGCAGCG AGCCGGACTT GCTGATCTTA GATCGCATGT TGCCCCATGT GGATGGGTTA
ACTCTATGCC AGCAAATCCG TGCGACGGGT AATCAGGTTT TAATCCTGAT GTTATCCGCT
TTGGGCGAGG TGGAGGAACG CATCCAAGGA TTGCGCACTG GTGCGGATGA TTACCTCGCC
AAGCCTTTCC ATTTTGAAGA GCTGTTGGCA CGCATCGAGG CACTGCAGCG GCGTAATATT
CAAACCCACA CCAGCAATAA GCTGCGTTTT GCTGATTTAG AGCTCTGCCT ATCCACTATG
CGCGTGTATC GTGCCGAGCA ACCGATAGAG CTGACGGCAA AAGAGATTTC AATACTTGAG
CTCTTTTTGC GTAAACCGGG GCATATTTTT AGCCGGGAGC GAATTTTGGC GAATGTGTGG
GGCATTCACC AAGATCCGCT GACCAATGTA GTCGATGTCT ATATGCGTCG TTTACGCAAG
AAAATCGATA TGCCTTTTGC CCAGCCGCTG ATCCAAACCA AGCGGGGTAT GGGGTATTAC
TTAGGTGACG CTTAA
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| Protein sequence | MRILLIEDDE RIARFIERGL KAEGHQIHRL KDGQYGLETV KSSEPDLLIL DRMLPHVDGL
TLCQQIRATG NQVLILMLSA LGEVEERIQG LRTGADDYLA KPFHFEELLA RIEALQRRNI
QTHTSNKLRF ADLELCLSTM RVYRAEQPIE LTAKEISILE LFLRKPGHIF SRERILANVW
GIHQDPLTNV VDVYMRRLRK KIDMPFAQPL IQTKRGMGYY LGDA
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