Gene VC0395_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0977 
Symbol 
ID5134568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp953473 
End bp954171 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content49% 
IMG OID640531299 
Productantibiotic acetyltransferase 
Protein accessionYP_001215813 
Protein GI147671828 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGCAA GTAGAAAGCG TCTGCACACC ACGAATTTGA GGTGGAATAT GAGTCAAAAG 
CATTGGTCAA AAGTCCAACT GCTGCATGAA GTAGTGAAAA ATCCAAACAT CATTATCAAA
GGTAAACACA GCTATTACAG CGATTGCTGG GATGCCGGTT TTGAAGCGTC GGTTGTGCGC
TATTTACATG GCGATGAGAT TAGCCAACGT TGGGACCCGT TATGGGAAAT CGATCAACTG
GTGATTGGTG ACTACGTTTG TATCGGGGCG GAAGTCGTGA TTTTAATGGG CGGTAATCAT
ACCCATAGAG CCGATTGGTT CTGCCTGTAT CCTTTTATGG ATGTGATTGA ACAAGCCTAC
GTAGGAAAAG GGAATACCGA GATTGGTGAT GGCGCATGGT TAGGGATGCG CGCCATGATC
ATGCCGGGTG TCAAGATTGG TGAAGGCGCG ATTGTGGCGG CCAATAGTGT CGTGACCAAA
GATGTGGCGC CTTACAGCAT TGTGGCGGGA TCGCCAGCCC AGTTGGTGAA GTACCGTTTT
GACGCAAAGG TGATTGACGA GCTGCTTGCG TTGAAAGTGT ACGACTGGCC GCCGGAAAAA
TTTACGGCGC TCAAATCGTA CTTATGCGCA TTGGATTTGG CGGCACTCAA GCAAGCGGTC
ATCCAATATG ATGCCGAGCC GCATAACCCA TTGAGCTAG
 
Protein sequence
MRASRKRLHT TNLRWNMSQK HWSKVQLLHE VVKNPNIIIK GKHSYYSDCW DAGFEASVVR 
YLHGDEISQR WDPLWEIDQL VIGDYVCIGA EVVILMGGNH THRADWFCLY PFMDVIEQAY
VGKGNTEIGD GAWLGMRAMI MPGVKIGEGA IVAANSVVTK DVAPYSIVAG SPAQLVKYRF
DAKVIDELLA LKVYDWPPEK FTALKSYLCA LDLAALKQAV IQYDAEPHNP LS