Gene VC0395_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0957 
Symbolcah 
ID5134216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp934127 
End bp934846 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640531279 
Productcarbonic anhydrase 
Protein accessionYP_001215793 
Protein GI147672042 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3338] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000379553 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CAACGTGGGT ATTAGCGATG GTAGCCAGTA TGAGCTTCGG CGTACAGGCT 
TCCGAGTGGG GGTATGAAGG AGAGCATGCT CCGGAGCATT GGGGCAAAGT TGCCCCTCTT
TGCGCAGAGG GTAAAAATCA AAGCCCGATT GATGTCGCGC AAAGCGTAGA AGCGGATCTA
CAGCCTTTCA CGCTCAATTA TCAAGGGCAA GTGGTTGGGC TGCTCAATAA CGGGCACACT
TTACAAGCGA TAGTCCGTGG TAATAACCCA CTGCAGATCG ATGGCAAAAC GTTTCAGCTT
AAGCAGTTTC ATTTTCATAC CCCTTCTGAA AATTTGCTAA AAGGAAAACA ATTCCCACTG
GAAGCGCATT TTGTTCATGC CGACGAGCAA GGCAATCTGG CGGTTGTTGC GGTGATGTAC
CAAGTGGGGT CGGAAAATCC GCTGCTTAAG GTTCTCACGG CGGATATGCC GACCAAAGGG
AATTCGACTC AGCTCACGCA AGGGATCCCT TTGGCTGATT GGATCCCAGA ATCGAAGCAC
TACTATCGTT TCAATGGTTC ATTGACTACG CCGCCTTGCA GTGAAGGTGT ACGTTGGATT
GTGTTAAAAG AGCCAGCACA TTTGTCGAAT CAACAAGAGC AGCAGCTTAG TGCCGTGATG
GGACACAATA ATCGACCCGT ACAACCGCAT AATGCTCGTC TTGTCTTGCA AGCCGACTAA
 
Protein sequence
MKKTTWVLAM VASMSFGVQA SEWGYEGEHA PEHWGKVAPL CAEGKNQSPI DVAQSVEADL 
QPFTLNYQGQ VVGLLNNGHT LQAIVRGNNP LQIDGKTFQL KQFHFHTPSE NLLKGKQFPL
EAHFVHADEQ GNLAVVAVMY QVGSENPLLK VLTADMPTKG NSTQLTQGIP LADWIPESKH
YYRFNGSLTT PPCSEGVRWI VLKEPAHLSN QQEQQLSAVM GHNNRPVQPH NARLVLQAD