| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0952 |
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| Symbol | glyA-2 |
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| ID | 5134951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 928491 |
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| End bp | 929798 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531274 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001215788 |
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| Protein GI | 147671645 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGCAA ATCTAAACAA AGCTTATCCC AACGTTAGCC TTGAGAACTT CTTCTCTACC
CCACTGGCGG CGACCAACGA TGCGGTATTT GCCGCCATTC AAGCTGAATA CACCCGCCAA
AATGAACAGA TCGAACTGAT TGCCTCTGAA AACATCGTCT CTAAAGCCGT AATGCAGGCG
CAAGGCACTT GCCTGACTAA CAAATACGCC GAAGGTTATC CCGGCCGTCG TTACTACGGC
GGTTGTGAGC ATGTTGACAG CGTTGAGCAG ATTGCTATCG AACGCGCCAA AATGCTTTTT
CAGTGTCAAT ACGCAAACGT TCAACCACAC TCAGGCGCTC AAGCCAATGG CGCTGTGATG
CTTGCTCTGC TGCAACCGGG CGACACTATT ATGGGTATGT CGCTAGATGC AGGCGGTCAT
CTCACGCATG GTGCGCGCCC TGCTCTTTCA GGTAAATGGT TCAATGCGGT GCAATACGGT
GTGGATCGCC AAACCCTCGA AATTAACTAC GATTCTGTTC GTGCACTGGC GTTAGAGCAC
AAACCCAAAA TGATCATCGC AGGCGGCAGT GCCATTCCCC GCACTATCGA TTTTGCTCAA
TTTCGCTCAA TTGTGGACGA AGTTGGCGCG CTGTTGATGG TCGATATGGC GCACATTGCC
GGATTGGTAG CAACTGGCGC ACATCCAAGC CCATTGCCGC ATGCTCATGT CGTCACCACT
ACCACACACA AAACTCTACG TGGCCCGCGC GGCGGCATGA TTTTGACCAA CAGCGAAGAG
ATCCACAAAA AGATCAATTC TGCGGTGTTC CCCGGTTTAC AAGGTGGCCC ACTGATGCAC
GTGATTGCCG CTAAAGCAGT GGCATTTGGT GAAGCGCTCG GCCCTGAATT CCGTACTTAT
ATTGATTCGG TGATCGATAA CGCAAAAGTG CTGGCTGAAG TGTTGCAAAC TCGCGGGTGT
GACATTGTGA CTGGCGGAAC GGATACGCAT CTCATGTTGG TCGACCTTAG ACCTAAAGGT
TTGAAAGGCA ACCAAGTTGA ACAAGCCTTA GAGCGTGCCG GGATCACGTG TAACAAAAAT
GGCATCCCAT TTGACGAAGA GAAGCCTATG ATTACATCGG GCATTCGTTT AGGTACGCCT
GCCGGAACCA GCCGTGGTTT CGGTCGTGAA GAATTCAAAC TCATCGGTGA GTGGATTGGG
GACGTTCTGG ATGGTTTGGT GGCCAGCCCA GAAGGCAACC CAGACGTTGA GCAACAAGTG
CGTAAACAAG TGAAAGCACT GTGCCAACGC TTCCCGCTCT ATCAATAG
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| Protein sequence | MNANLNKAYP NVSLENFFST PLAATNDAVF AAIQAEYTRQ NEQIELIASE NIVSKAVMQA
QGTCLTNKYA EGYPGRRYYG GCEHVDSVEQ IAIERAKMLF QCQYANVQPH SGAQANGAVM
LALLQPGDTI MGMSLDAGGH LTHGARPALS GKWFNAVQYG VDRQTLEINY DSVRALALEH
KPKMIIAGGS AIPRTIDFAQ FRSIVDEVGA LLMVDMAHIA GLVATGAHPS PLPHAHVVTT
TTHKTLRGPR GGMILTNSEE IHKKINSAVF PGLQGGPLMH VIAAKAVAFG EALGPEFRTY
IDSVIDNAKV LAEVLQTRGC DIVTGGTDTH LMLVDLRPKG LKGNQVEQAL ERAGITCNKN
GIPFDEEKPM ITSGIRLGTP AGTSRGFGRE EFKLIGEWIG DVLDGLVASP EGNPDVEQQV
RKQVKALCQR FPLYQ
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