| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0947 |
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| Symbol | |
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| ID | 5134834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 923456 |
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| End bp | 924436 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531269 |
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| Product | IS5 transposase |
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| Protein accession | YP_001215783 |
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| Protein GI | 147671737 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATC AACTGACTTT CGCAGACGGT GAGTTTTCCA ATAAACGTCG ACAAACCCGC
AAAGAGCTCT TCCTCGCCAG AATGGAGAAG CTCCTACCAT GGTCTCAGTT GCTCGCGGTG
ATCGAACCCT TTTATCCCAA GGCGGGCAAT GGCCGCCGCC CTTATCCTCT CGAAACCATG
TTCCGCATCC ACTGTATGCA GCAGTGGTAC AGCTTAAGTG ACGAAGCGAT GGAAGATGCA
CTCTATGAGA TCGCGTCCAT GCGGTTATTT GCCCATCTTT CGCTGGACAG AGCCATTCCC
GACCGCACTA CCATCATGAA CTTCCGCCAC TTGTTAGAGC AGCATCAGCT GGGACGCAGT
GTGTTCGAGC CGATCAATCA ATGGCTCAGC GAGCGCGGCG TGCTGATGAA GCAAGGCACG
TTGGTCGATG CGACGATTAT CGAAGCGCCC AGCTCGACCA AGAACAAAAC CAACCAACGT
GATCCCGGAA TGCACCAGAC CAAGAAAGGC AATGAGTGGC ACTTCGGTAT GAAGGCACAT
ATTGGTGTGG ATGCCAAAAG TGGCCTCACT CATACACTGG TGACTACTGC CGCTAACGAG
CATGATCTGA ATCAATTGAG CAACCTGCTA CACGGTGATG AAGAATTCGT CTCCGGTGAT
GCAGGCTACC AAGGTGCACA CAAGCGCGAC GAGCTGAAGG GGGCAGACGT TGATTGGCTG
ATAGCCGAAC GTCCCGGTAA AGTTCGCGCC CTGAAAAAGC ACCCTCGCAA AAACAAAGTG
GCCATCCATA TCGAATACTT GAAAGCCAGC ATTCGGGCCA AAGTCGAGCA CCCGTTTCGC
ATCATTAAAT GCCAGTTTGG TTTTATCAAA GCCCGCTACA AAGGCCTGAT GAAAAACGAC
AACCAATTAG CCATGCTATT CACCTTGGCG AATCTGGTCA AAGTCGACCA ACTGATACGA
CGACAGGCGA GATCTGCCTG A
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| Protein sequence | MSHQLTFADG EFSNKRRQTR KELFLARMEK LLPWSQLLAV IEPFYPKAGN GRRPYPLETM
FRIHCMQQWY SLSDEAMEDA LYEIASMRLF AHLSLDRAIP DRTTIMNFRH LLEQHQLGRS
VFEPINQWLS ERGVLMKQGT LVDATIIEAP SSTKNKTNQR DPGMHQTKKG NEWHFGMKAH
IGVDAKSGLT HTLVTTAANE HDLNQLSNLL HGDEEFVSGD AGYQGAHKRD ELKGADVDWL
IAERPGKVRA LKKHPRKNKV AIHIEYLKAS IRAKVEHPFR IIKCQFGFIK ARYKGLMKND
NQLAMLFTLA NLVKVDQLIR RQARSA
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