| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0939 |
|---|
| Symbol | rplT |
|---|
| ID | 5134202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 916432 |
|---|
| End bp | 916785 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640531261 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_001215775 |
|---|
| Protein GI | 147672501 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000000748381 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCG TAAAACGTGG TGTACAAGCT CGTGCACGTC ATAAGAAAGT TTTAAAACAA
GCTAAAGGTT ACTACGGTGC ACGTTCACGT GTTTATCGTG TAGCGTTCCA AGCAGTTATT
AAAGCTGGTC AATACGCTTA CCGTGACCGT CGCGCTAAGA AACGTCAATT CCGTCAACTG
TGGATTGCAC GTATCAACGC AGCGGCTCGT CAAAATGGTC TATCTTACAG CCGTTTCATC
AACGGTCTGA AGAAAGCATC TATCGAGATC GATCGTAAGA TCCTTGCTGA TATCGCAGTA
TTCGACAAAG CAGCATTCGC TGTTCTGGTT GAAAAGGCGA AAGGCGCTCT GTAA
|
|---|
| Protein sequence | MPRVKRGVQA RARHKKVLKQ AKGYYGARSR VYRVAFQAVI KAGQYAYRDR RAKKRQFRQL
WIARINAAAR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKAAFAVLV EKAKGAL
|
|---|
| |