| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0938 |
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| Symbol | intI4 |
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| ID | 5134466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 915388 |
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| End bp | 916350 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640531260 |
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| Product | site-specific recombinase IntI4 |
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| Protein accession | YP_001215774 |
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| Protein GI | 147671698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000827497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCCC AGTTTTTGTT AAGTGTTCGC GAATTTATGC AAACTCGATA CTATGCAAAA
AAAACCATAG AAGCTTACCT TCATTGGATC ACTCGTTACA TCCATTTTCA TAATAAAAAG
CACCCTAGCT TAATGGGAGA TAAAGAGGTC GAAGAATTTT TAACCTACTT AGCCGTGCAA
GGTAAAGTGG CCACAAAGAC TCAATCACTA GCCTTGAACT CACTCAGTTT TCTATACAAA
GAAATTCTAA AAACACCCCT TTCTCTTGAG ATCCGCTTTC AACGCTCGCA ACTAGAACGA
AAGTTACCGG TTGTACTGAC TAGAGATGAG ATTCGACGTT TACTTGAAAT TGTCGATCCT
AAGCATCAAC TTCCCATCAA GTTACTCTAC GGTTCGGGGT TAAGGTTGAT GGAGTGTATG
CGCTTGAGAG TCCAAGATAT CGATTTTGAT TATGGTGCAA TCAGAATCTG GCAAGGTAAG
GGGGGTAAAA ATCGCACGGT CACGTTAGCA AAAGAACTCT ATCCGCATCT TAAAGAGCAA
ATTGCGCTAG CAAAACGCTA TTACGATCGA GACTTGCACC AAAAAAACTA CGGCGGGGTT
TGGCTGCCCA CAGCCTTAAA AGAAAAGTAT CCAAATGCAC CTTATGAGTT TCGTTGGCAC
TATCTTTTTC CGTCTTTTCA GTTATCTCTA GATCCGGAAT CCGATGTGAT GCGCCGCCAT
CATATGAACG AAACAGTACT ACAAAAAGCG GTGAGAAGAT CGGCTCAAGA AGCGGGGATT
GAAAAGACCG TGACTTGCCA CACTCTCAGA CATTCATTTG CAACCCATTT GCTTGAAGTG
GGGGCTGATA TACGTACCGT ACAAGAGCAA CTAGGACATA CCGATGTAAA AACGACACAG
ATTTACACTC ATGTTCTTGA TAGAGGTGCA AGCGGTGTTT TAAGCCCATT ATCCCGTCTT
TAG
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| Protein sequence | MKSQFLLSVR EFMQTRYYAK KTIEAYLHWI TRYIHFHNKK HPSLMGDKEV EEFLTYLAVQ
GKVATKTQSL ALNSLSFLYK EILKTPLSLE IRFQRSQLER KLPVVLTRDE IRRLLEIVDP
KHQLPIKLLY GSGLRLMECM RLRVQDIDFD YGAIRIWQGK GGKNRTVTLA KELYPHLKEQ
IALAKRYYDR DLHQKNYGGV WLPTALKEKY PNAPYEFRWH YLFPSFQLSL DPESDVMRRH
HMNETVLQKA VRRSAQEAGI EKTVTCHTLR HSFATHLLEV GADIRTVQEQ LGHTDVKTTQ
IYTHVLDRGA SGVLSPLSRL
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