Gene VC0395_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0880 
Symbol 
ID5134295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp883102 
End bp883461 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content41% 
IMG OID640531202 
Producthypothetical protein 
Protein accessionYP_001215716 
Protein GI147672006 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGC ATGAAAAGCT TAATTATGTG GAGTTTGCAG TGAACGACTT AGAGTCAACG 
AAAGCGTTCT TTTCAAAGAC TTTTGGCTGG AGTTTTGTTG ACTATGGACC TGAATATACA
GCTTTCTCAA ATGAAGGCTT AGACGGTGGT TTTTTCAAGG CTGAGCTTTC TAGTCGGACT
GAAAATGGTG GCGCACTGTT AATTTTCTAC AGTTCGGACA TTGAAGCTAC TTTAGAAAAA
GTCGTGAAAA ATGGCGGTCA TATCATCCGT CCTATCTTTG AATTTCCTGG TGGTTGTCGT
TTTCATTTTA CAGAGCCAAG TGGTAATGAA TTTGCTGTTT GGTCTGAAGC ACGCGCATAA
 
Protein sequence
MNQHEKLNYV EFAVNDLEST KAFFSKTFGW SFVDYGPEYT AFSNEGLDGG FFKAELSSRT 
ENGGALLIFY SSDIEATLEK VVKNGGHIIR PIFEFPGGCR FHFTEPSGNE FAVWSEARA