Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0880 |
Symbol | |
ID | 5134295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 883102 |
End bp | 883461 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640531202 |
Product | hypothetical protein |
Protein accession | YP_001215716 |
Protein GI | 147672006 |
COG category | [R] General function prediction only |
COG ID | [COG3324] Predicted enzyme related to lactoylglutathione lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGC ATGAAAAGCT TAATTATGTG GAGTTTGCAG TGAACGACTT AGAGTCAACG AAAGCGTTCT TTTCAAAGAC TTTTGGCTGG AGTTTTGTTG ACTATGGACC TGAATATACA GCTTTCTCAA ATGAAGGCTT AGACGGTGGT TTTTTCAAGG CTGAGCTTTC TAGTCGGACT GAAAATGGTG GCGCACTGTT AATTTTCTAC AGTTCGGACA TTGAAGCTAC TTTAGAAAAA GTCGTGAAAA ATGGCGGTCA TATCATCCGT CCTATCTTTG AATTTCCTGG TGGTTGTCGT TTTCATTTTA CAGAGCCAAG TGGTAATGAA TTTGCTGTTT GGTCTGAAGC ACGCGCATAA
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Protein sequence | MNQHEKLNYV EFAVNDLEST KAFFSKTFGW SFVDYGPEYT AFSNEGLDGG FFKAELSSRT ENGGALLIFY SSDIEATLEK VVKNGGHIIR PIFEFPGGCR FHFTEPSGNE FAVWSEARA
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