Gene VC0395_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0872 
Symbol 
ID5134632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp878541 
End bp878939 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content41% 
IMG OID640531194 
Productglyoxalase family protein 
Protein accessionYP_001215708 
Protein GI147671597 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTC TGATGAAAAT TAGTCACCTT GATCATTTGG TTCTGACTGT TGCAGATATT 
CCAACAACAA CGAACTTTTA TGAAAAAGTG TTGGGCATGA AAGCTGTTAG TTTTGGCGCT
GGTCGGATTG CTCTAGAGTT TGGTCACCAG AAGATCAATC TTCATCAACT CGGTAATGAG
TTTGAACCTA AAGCCCAAAA TGTCAGAGTT GGGAGCGCAG ATTTGTGCTT TATTACCGAC
ACAGTTCTGT CTGATGCGAT GAAGCATGTG GAGAATCAAG GTGTGACTAT CATGGAGGGG
CCTGTAAAAC GTACAGGTGC ACAAGGTGCA ATCACATCAT TCTATTTCAG AGACCCTGAT
GGGAATCTTA TTGAAGTATC AACGTATTCA AACACATAA
 
Protein sequence
MEFLMKISHL DHLVLTVADI PTTTNFYEKV LGMKAVSFGA GRIALEFGHQ KINLHQLGNE 
FEPKAQNVRV GSADLCFITD TVLSDAMKHV ENQGVTIMEG PVKRTGAQGA ITSFYFRDPD
GNLIEVSTYS NT