Gene VC0395_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0835 
Symbol 
ID5134494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp860294 
End bp860728 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID640531157 
Producthypothetical protein 
Protein accessionYP_001215671 
Protein GI147672257 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.353458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGA GTAAATTCCG ACTTTGCTCA ACAAAAGGAA CAAGTATGTT TAGTCACATC 
ATGATCGGCT CAAATGATAT TGAAAAGTCA AAGGTTTTCT ATGATGCCAT ATTGTCGGTG
TTAGGTTATC CGGCGGGTGT TATTGACGCT AAAGGCCGCT GTCTCTACAT AAACCAAGAC
GGTGTGCTTG GTATTACTAA ACCAGTAAAT GGTGAACCTG CGACGCATGG TAATGGGATG
ACAATTGGCT TCAAAGTTAG TAGCCCAGAG TTAGTAGAAG CATGGCATGC AGCCGGTTTA
GCAAATGGTG GAGTTGCTTG TGAAGATCCT CCGGGTATCA GAACGAGTGG ACAAAGAAAA
ATGTATTTAG CTTATTTACG AGATCCTGCA GGCAATAAGC TATGTGCAAC ACATCATATG
TCCACGGGCA ACTAA
 
Protein sequence
MPQSKFRLCS TKGTSMFSHI MIGSNDIEKS KVFYDAILSV LGYPAGVIDA KGRCLYINQD 
GVLGITKPVN GEPATHGNGM TIGFKVSSPE LVEAWHAAGL ANGGVACEDP PGIRTSGQRK
MYLAYLRDPA GNKLCATHHM STGN