Gene VC0395_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0831 
Symbol 
ID5134409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp858099 
End bp858614 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content39% 
IMG OID640531153 
Productputative acetyltransferase 
Protein accessionYP_001215667 
Protein GI147671478 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.591066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA AAGTGATTAT TAGAAAAGTA ACAGTCGAAG ATGCAGAGTC AGTATTGTCA 
TTAATGTACC AATTAGATCG AGAGTCTAAA TTTATGCTGC TTGAACCAGA AGAAAGGACA
ACCACACTGG AGCAGCAAAT CCAAATTATT CACTCATTCA ATGATTCATC TAATAAGGTG
ATGTATTTAC TGACCAATGA TGAAAAGGCT TTTGGTTTCA TTGTCGGTGT AGGTAATACA
GCCAATCGCA ATAAACACTG CATGTCTTTG GTCATTGGCC TTCTCCAAGC TGTTAAAGGC
CAAGGATTTG GAAAAGAATT AGTAAACAAG CTTGAAGGCT GGGCGATTTC TCATGGATAT
AGCCGGCTAG AGTTGACCGT AATGCAGCAC AATGAGAGAG CTAAAAGGCT CTATGAGTCA
TGTGGTTTTG AAGTTGAGGG TTTAAAGCGC CATTCTCTGG TTGTCGATGG TGAGTATGTT
AATGAGCTGT ATATGTCTAA GCTATTAACC GCATAA
 
Protein sequence
MDEKVIIRKV TVEDAESVLS LMYQLDRESK FMLLEPEERT TTLEQQIQII HSFNDSSNKV 
MYLLTNDEKA FGFIVGVGNT ANRNKHCMSL VIGLLQAVKG QGFGKELVNK LEGWAISHGY
SRLELTVMQH NERAKRLYES CGFEVEGLKR HSLVVDGEYV NELYMSKLLT A