| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0829 |
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| Symbol | mccF-2 |
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| ID | 5134060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 856406 |
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| End bp | 857410 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640531151 |
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| Product | microcin immunity protein MccF |
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| Protein accession | YP_001215665 |
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| Protein GI | 147671439 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.181622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTATATG CCAAAGCTTT AAGTATTGGA GACAAAATTG GTTTTTTCTC ACCATCTTCA
CCGGCTACAG CCTTTGCTCC AAATCGATTT CAAAGAGCAA AAGCTTACCT TAAGGCACAG
GGATTTGAGT TAGTTGAAGG TTCGCTTACG GGAAAATCTG ATTATTACCG CTCAGGCTCG
ATTCGGGAGC GTGCTGAAGA ATTGAATCAA CTTATTCGGG ATCCGAATGT CCGTTGCATC
ATGTCTACCA TTGGAGGCAA TAATAGCAAT TCACTGTTGC CGTATATTGA TTATGAAGCC
TTAAGAAACG ATCCAAAGCT CATCATTGGT TATTCAGATG TCACAGCTTT ATTGCTCGGG
ATCTATGCTC AAACAGGACT CATCACATTT TATGGCCCAG CCTTAGTCGC TTCGTTTGGT
GAGTATCCTC CATTGGTGAA TGAAACCTTT CATTCGTTTA TCGATCTATT GTGTTCAGAG
ACGAATCAAT ATCAATACAC TATGCCCTCG TCATGGACAG ATATTAAGCA CGATTGGGAA
ACTCAGCATT CAGCTAAGCC CGTTTATCCG AATGAATGGC AGTTTATCGG TAAAGGCAAA
GTGACAGGCA GAATTATTGG CGGGAACCTC AACACCATGG CTGGGATCTG GGGCAGTCGA
TACATGCCAG AGATTGAAGT TGGCGATATT TTACTCATAG AGGATTCTCT GAAAGGTATC
GAAAATGTCG AACGTTCTTT TGCACATCTC GCAGCTTGTG ACGTTTTTGA GCGGGTGAGT
GCGATCATTT TGGGGAAGCA TGAGTTATTT GACAACAAAG GTACAGGGAG AACACCTCTG
GACGTTTTAA TCGAAGTATT AGCGGATAAA AATGTACCTA TATTTTATGG TTTTGATAGT
TGTCATACGC ATCCGATGCT CGTCACACCA TTAGGTGTGC GAGGTACAAT CGATTTCGAC
AATCATACCT TTAAGCTAGA AGAGCGTTGG GTAAAAGCAA AATAA
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| Protein sequence | MLYAKALSIG DKIGFFSPSS PATAFAPNRF QRAKAYLKAQ GFELVEGSLT GKSDYYRSGS
IRERAEELNQ LIRDPNVRCI MSTIGGNNSN SLLPYIDYEA LRNDPKLIIG YSDVTALLLG
IYAQTGLITF YGPALVASFG EYPPLVNETF HSFIDLLCSE TNQYQYTMPS SWTDIKHDWE
TQHSAKPVYP NEWQFIGKGK VTGRIIGGNL NTMAGIWGSR YMPEIEVGDI LLIEDSLKGI
ENVERSFAHL AACDVFERVS AIILGKHELF DNKGTGRTPL DVLIEVLADK NVPIFYGFDS
CHTHPMLVTP LGVRGTIDFD NHTFKLEERW VKAK
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