Gene VC0395_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0826 
Symbol 
ID5134170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp854148 
End bp854624 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content39% 
IMG OID640531148 
Productputative acetyltransferase 
Protein accessionYP_001215662 
Protein GI147672342 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.450111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG AAGAGTTTCA AGAATCGGAT TTTGACCTGC TTATAAAATG GATTGACTCA 
GATGAGTTGA ACTATTTATG GGGTTGCCCT GCGTATGTTT TCCCGCTGAC TTATGAACAG
ATCCATTCCC ACTGTAGCAA AGCGGAAGTA TTTCCCTATC TGCTAAAAGT GAAAGGTAGA
CATGCCGGGT TTGTTGAGTT GTACAAAGTC ACCGATGAGC AATATCGGAT TTGCCGTGTC
TTTATTTCAA ATGCTTATCG TGGGCAAGGG CTATCAAAAT CGATGTTGAT GTTATTAATC
GATAAAGCCC GATTAGATTT TTCTGCAACC AAGCTTAGCT TAGGCGTTTT TGAACAGAAC
ACAGTTGCTA GAAAATGCTA TGAGTCATTA GGTTTTGAAG TGGTTTCGAC AGAAATTGGT
ACAAGAGCTT TTAATGGTAA GTTATGGGAT CTGGTGCGAA TGGAAAAACG GTTATAA
 
Protein sequence
MNLEEFQESD FDLLIKWIDS DELNYLWGCP AYVFPLTYEQ IHSHCSKAEV FPYLLKVKGR 
HAGFVELYKV TDEQYRICRV FISNAYRGQG LSKSMLMLLI DKARLDFSAT KLSLGVFEQN
TVARKCYESL GFEVVSTEIG TRAFNGKLWD LVRMEKRL