| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0824 |
|---|
| Symbol | blc-4 |
|---|
| ID | 5134941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 853496 |
|---|
| End bp | 854011 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640531146 |
|---|
| Product | lipoprotein Blc |
|---|
| Protein accession | YP_001215660 |
|---|
| Protein GI | 147672502 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3040] Bacterial lipocalin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.424755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCTA TCTTTTTGAT TCTTTGCTCT GTTTTATTAA ATGGCTGCTT GGGCATGCCC
GAATCAGTAA AACCAGTGTC GGATTTTGAA CTGAACAACT ATTTAGGCAA ATGGTACGAG
GTTGCTCGAC TCGATCACTC CTTTGAAAGA GGTTTAAGTC AGGTTACTGC GGAATACCGT
GTTCGAAATG ATGGTGGTAT TTCGGTTCTT AATCGTGGTT ATTCTGAAGA GAAAGGTGAG
TGGAAGGAAG CGGAAGGTAA AGCTTACTTT GTGAATGGCT CAACAGATGG CTATCTGAAG
GTTTCATTTT TTGGCCCGTT TTATGGCTCC TACGTAGTGT TTGAGTTAGA CCGTGAAAAC
TACAGTTATG CTTTTGTGTC AGGGCCGAAT ACAGAATATC TGTGGTTACT TTCAAGAACG
CCGACTGTAG AACGAGGCAT TCTGGACAAG TTCATAGAAA TGTCGAAAGA GCGTGGTTTT
GATACAAATC GGCTTATTTA CGTTCAGCTG CAATAA
|
|---|
| Protein sequence | MRAIFLILCS VLLNGCLGMP ESVKPVSDFE LNNYLGKWYE VARLDHSFER GLSQVTAEYR
VRNDGGISVL NRGYSEEKGE WKEAEGKAYF VNGSTDGYLK VSFFGPFYGS YVVFELDREN
YSYAFVSGPN TEYLWLLSRT PTVERGILDK FIEMSKERGF DTNRLIYVQL Q
|
|---|
| |