| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0793 |
|---|
| Symbol | |
|---|
| ID | 5135007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 833580 |
|---|
| End bp | 834035 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640531115 |
|---|
| Product | putative acetyltransferase |
|---|
| Protein accession | YP_001215629 |
|---|
| Protein GI | 147671878 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.294913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAATA TGGATATCAA ATTACGACCA ATAGAAAGTG AAGAGTTCGA TAGTCTTTTT
TCTGTTGTAA AGCAGGGAAT TTATTCACAC GTTGATGCTG TTTTTGGTTG GGACGATGAC
TTTCAACGTA AACGTCTAAA AAGAGACTAT GACCCTAGTT GGTTTTACTG GGTACAACAA
GGAGGTCAGC GAATTGGCAT GTTGTGTTTC AAACCTTATG ACAATGTAAT TCATGTTCAT
CTACTTGTTG TTTTTCCCGA GTTTCAGAAC CAAAAGTTTG GGGAAAAGAT AATGAGTTAT
GTCCATAAGC TCGCGGACGC TGAGGGGAGA AATCGGGTGA CGTTATCCAG CTTTATCCGA
AATGAGGCCG CGGTAAGATT TTACAAATCG CTTGGTTATC AGCTTATTGA TAGTGACGAG
CACTTTTATT CTTTGTCGCT TCAAATTTCC TCATAA
|
|---|
| Protein sequence | MRNMDIKLRP IESEEFDSLF SVVKQGIYSH VDAVFGWDDD FQRKRLKRDY DPSWFYWVQQ
GGQRIGMLCF KPYDNVIHVH LLVVFPEFQN QKFGEKIMSY VHKLADAEGR NRVTLSSFIR
NEAAVRFYKS LGYQLIDSDE HFYSLSLQIS S
|
|---|
| |