Gene VC0395_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0728 
Symbol 
ID5134556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp791138 
End bp791767 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content47% 
IMG OID640531050 
ProductDnaJ family protein 
Protein accessionYP_001215564 
Protein GI147672198 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACA GTCACCAGCT TGCTGCAACG TTTCAGACTT ATATGGAAAA TCCGCTGTTG 
TGGCCGATTT TTGAGGTTCT GAAACGCCAG CCTTCAGGAT GGAAAGTGCA TACCTTAGCC
GCTCACTTGA GTGAGTTAGG CATCATGCCG GTCTTAGACC CTCAGCCGGA AAAAGATCTG
TTCAAGCGAA ATTTCCTGAT CATGAATGCG CTCTATCAGC TCCAAGAAAC CTTGCACCCA
GAAAAATGGC TGCAAGTGGA AGCGATGAAC ATCATTTTAA CTCCGATGAT GCGTAGTGAA
TTCCACGACA TTGATGTCAA TGATCCTTTG CGAGATTACT ACACTCAGTG GATGAACTAT
GAAGCGAATG AGGGGGAAGT GAAGCGTTTG CTCAATGAAT TCTGGACGCG ATATCGACAC
TCAGTGGGCA GCCATAATGG TAAGGATTTA ACCCGAGGAC AAGCTCTGCG TCTGTTTGAA
TTAACCGAAG AGGCGAGCGC CGTTGAGATC CGTAAAACGT GGCGTAAGCT GGCTTTGCGT
TGGCATCCCG ATCGAGAAAA TGGCAATGCC GAACGTTTTC GGATCTTATG TGAAGCGTGG
AATGTGCTCA GACAAGACTC TTTAGTTTAA
 
Protein sequence
MSDSHQLAAT FQTYMENPLL WPIFEVLKRQ PSGWKVHTLA AHLSELGIMP VLDPQPEKDL 
FKRNFLIMNA LYQLQETLHP EKWLQVEAMN IILTPMMRSE FHDIDVNDPL RDYYTQWMNY
EANEGEVKRL LNEFWTRYRH SVGSHNGKDL TRGQALRLFE LTEEASAVEI RKTWRKLALR
WHPDRENGNA ERFRILCEAW NVLRQDSLV