Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0728 |
Symbol | |
ID | 5134556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 791138 |
End bp | 791767 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531050 |
Product | DnaJ family protein |
Protein accession | YP_001215564 |
Protein GI | 147672198 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACA GTCACCAGCT TGCTGCAACG TTTCAGACTT ATATGGAAAA TCCGCTGTTG TGGCCGATTT TTGAGGTTCT GAAACGCCAG CCTTCAGGAT GGAAAGTGCA TACCTTAGCC GCTCACTTGA GTGAGTTAGG CATCATGCCG GTCTTAGACC CTCAGCCGGA AAAAGATCTG TTCAAGCGAA ATTTCCTGAT CATGAATGCG CTCTATCAGC TCCAAGAAAC CTTGCACCCA GAAAAATGGC TGCAAGTGGA AGCGATGAAC ATCATTTTAA CTCCGATGAT GCGTAGTGAA TTCCACGACA TTGATGTCAA TGATCCTTTG CGAGATTACT ACACTCAGTG GATGAACTAT GAAGCGAATG AGGGGGAAGT GAAGCGTTTG CTCAATGAAT TCTGGACGCG ATATCGACAC TCAGTGGGCA GCCATAATGG TAAGGATTTA ACCCGAGGAC AAGCTCTGCG TCTGTTTGAA TTAACCGAAG AGGCGAGCGC CGTTGAGATC CGTAAAACGT GGCGTAAGCT GGCTTTGCGT TGGCATCCCG ATCGAGAAAA TGGCAATGCC GAACGTTTTC GGATCTTATG TGAAGCGTGG AATGTGCTCA GACAAGACTC TTTAGTTTAA
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Protein sequence | MSDSHQLAAT FQTYMENPLL WPIFEVLKRQ PSGWKVHTLA AHLSELGIMP VLDPQPEKDL FKRNFLIMNA LYQLQETLHP EKWLQVEAMN IILTPMMRSE FHDIDVNDPL RDYYTQWMNY EANEGEVKRL LNEFWTRYRH SVGSHNGKDL TRGQALRLFE LTEEASAVEI RKTWRKLALR WHPDRENGNA ERFRILCEAW NVLRQDSLV
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