Gene VC0395_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0718 
Symbol 
ID5134021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp778058 
End bp778987 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content54% 
IMG OID640531040 
Producthypothetical protein 
Protein accessionYP_001215554 
Protein GI147671540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00184612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGGTA AGCTACACGT GATCAAAGCG GGACCACTCA CGCTACTTCA CGACTTGGGT 
CGCTATGGGT TCAGTCATTT CGGGATCACC CCTTCCGGCC CTCTCGATGA ATACGCCTAC
AGCTGGGCTA ACCATTTACT CGCCAATACC GTCAATTGCG CCACCTTAGA AATCACGCTC
GGTCCAGCGG AATTTCTTTT ACGCAGCGAC GCGCAATTGG CGATTGCCGG TGGCGATCTC
AATGCCACGC TAGACGGTCG CCCCATCGCC AATTGGAGCC GATTTTATGC CAAGCAAGGA
CAAACGCTGC GCTTTGGTTT ACCACGCAAC GGGCTACGCG CCTATCTTGC GGTTCAAGGA
GGGTTTACGG TCTCTCCACA ACTGGGCTCT GTATCTACCC ATGTTCGGCA AGGCTTAGGT
GGACTAACGT CGCAAGGGCT GGCGCTACAA ACGGGTGATG ACTTAGCATT TTCCGCGCAG
CAGATTGCCC AGAAACCGGT GCTGATGACG TTTCGCTTTC GACCTGATTA CAACTTACCT
CTGCGACTGC GCGTGATTGA GAGTTACCAA TATCAAGCGT TTTCACCATC CGCGATGGAA
AGCTTCTACC GCAGCGAGTT TATCGTGACC CCAAACAGCG ATCGCATGGG CTATCGCTTG
CAAGGTGAAA CCATATCGCC ACCGGATCAA ACCATTCTCT CTGAGGGGAT TGCCTTGGGG
GCGATTCAAG TTCCGCCGAA TGGTCAGCCA ATCATTTTGC TCAATGATCG GCAGACGATT
GGCGGGTATC CCAAGCTAGG TTGTGTAGCG AGAATCGATC TGCCCCGTTT AGCGCAAGCC
AAGCCGGGAC ATTCCGTACG GTTTGTCGCT GGCGATCTCG CTGGGCTTCA AGCGGTGTGG
TGTCAGTGGG CGCGATTTTT CGGTTACTGA
 
Protein sequence
MLGKLHVIKA GPLTLLHDLG RYGFSHFGIT PSGPLDEYAY SWANHLLANT VNCATLEITL 
GPAEFLLRSD AQLAIAGGDL NATLDGRPIA NWSRFYAKQG QTLRFGLPRN GLRAYLAVQG
GFTVSPQLGS VSTHVRQGLG GLTSQGLALQ TGDDLAFSAQ QIAQKPVLMT FRFRPDYNLP
LRLRVIESYQ YQAFSPSAME SFYRSEFIVT PNSDRMGYRL QGETISPPDQ TILSEGIALG
AIQVPPNGQP IILLNDRQTI GGYPKLGCVA RIDLPRLAQA KPGHSVRFVA GDLAGLQAVW
CQWARFFGY