| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0709 |
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| Symbol | |
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| ID | 5134751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 769816 |
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| End bp | 771084 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531031 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_001215545 |
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| Protein GI | 147671636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAC TCTCCATCAC TTTTTCGCAA TTAGGCTTGG ATTCTCGTCT GCTGAATACA
TTGAGCGAGC TTGGGATCGC CAATCCCACG CCAATCCAAC AGCAAGCTAT TCCTCATGTA
TTGCAAGGAA AAGATGTACT GGCAGGGGCG CAAACCGGAA CCGGTAAAAC GGCGGCATTT
GGCTTACCTT TGATCCAACG CTTTATTGAG CAGCCTTGGC AGCGTGAAGC AAACAGCAAA
GAGATCCGGG CGTTAGTGCT GGTGCCAACG CGTGAGTTAG CTCAGCAAGT ATTGGATAGC
CTACAAGCCT ACGCGAAAGG AACGGAGCTT AAGATCGTAG CCGTTTATGG CGGCACGAGC
ATGAAGGTAC AGCTCAATCA TTTGCGTGGT GGTGTGGATA TTTTGATTGC GACGCCGGGG
CGTTTGCTCG ATCACGCCCA TGTGAAATCG CTGTTTTTGG GCAAAGTTGA AGTGTTGGTA
CTCGATGAAG CGGATCGCAT GCTGGATATG GGCTTTATGC CAGATTTGCA GCGCGTGCTG
CGCCGTTTAT CGCCACTGCG TCAAACGCTG TTTTTCTCTG CAACGTTTGA TAGCAAAATC
AAAGCGGTGG CGTATCGCAT CATGCGTGAT CCTATCGAAG TGCAGGTGAC GCCATCCAAT
TCCACGGCAG AAACCGTGCA GCAGATGGTG TATCCGGTGG ATAAAAAGCG CAAACGCGAA
CTGCTCTCTT ATCTGATTGG CTCGAAAAAT TGGCAGCAAG TGTTGGTGTT TACCAAAACC
CGTCAAGGCA GTGATGCACT TGCGGAAGAA CTCAAGTTGG ATGGTATAAA AGCGGTGTCG
ATTAATGGCG ATAAAAGCCA AGGTGCACGC CAAAAGGCTT TGGATGATTT TAAAGCAGGC
AAAGTGCGTG CTTTGATTGC GACCGATGTC GCCGCACGTG GGTTAGATAT TGCCCAGCTT
GAGCAAGTGG TGAACTACGA TATGCCATTT AAAGCGGAAG ACTATGTGCA TCGTATTGGG
CGTACGGGAC GCGCAGGTTT AGCGGGATTG GCGGTCTCTT TGCTGTCGCA TGATGAACAG
CCACAACTCG AAGCGATTGA GCGTTTACTC AATACACGTC TTCCTCAAGA ATGGTTGAAA
GGTTTTGAGC CTAGCCCTGT GGTGCATGAG GAAAATTCAC CGCGTCGCTC GGCTGGCCGT
TCGTCAGAAA AACGCAAACT AAAAGCACAA CTGAAAATCC ATGCGCAGCG CGGTAAAAAA
GCGCGTTAA
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| Protein sequence | MSELSITFSQ LGLDSRLLNT LSELGIANPT PIQQQAIPHV LQGKDVLAGA QTGTGKTAAF
GLPLIQRFIE QPWQREANSK EIRALVLVPT RELAQQVLDS LQAYAKGTEL KIVAVYGGTS
MKVQLNHLRG GVDILIATPG RLLDHAHVKS LFLGKVEVLV LDEADRMLDM GFMPDLQRVL
RRLSPLRQTL FFSATFDSKI KAVAYRIMRD PIEVQVTPSN STAETVQQMV YPVDKKRKRE
LLSYLIGSKN WQQVLVFTKT RQGSDALAEE LKLDGIKAVS INGDKSQGAR QKALDDFKAG
KVRALIATDV AARGLDIAQL EQVVNYDMPF KAEDYVHRIG RTGRAGLAGL AVSLLSHDEQ
PQLEAIERLL NTRLPQEWLK GFEPSPVVHE ENSPRRSAGR SSEKRKLKAQ LKIHAQRGKK
AR
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