Gene VC0395_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0698 
SymbolartM 
ID5133966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp759964 
End bp760632 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID640531020 
Productarginine transporter permease subunit ArtM 
Protein accessionYP_001215535 
Protein GI147672214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.180995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGC AACACCTATG GCAACTGCTT GAAGGCTTAG GCACCAGTTT GCAACTGACG 
GCAGCTTCGC TGCTGGTGGG TTGCATATTG TCACTCTTGA TGACCGTAAG CTTAGTGATG
CGCACGCCCG TCGTGCATTG GTTTAGCCGT GCGGTGATCA CCTTGTTTAC CGGCACTCCG
CTGCTGGTGC AAATTTTCTT GGTGTATTAC GGCCCTGGAC AGTTTGAATG GATCCGCGAA
AGCGTACTTT GGGTATGGCT CAGCCAACCT TGGTTTTGCG CTATGCTGGC TTTGGCGCTC
AACACTGCGG CGTACAGCAC GCAACTGTTT AAAGGCGCAT TTAACGCCAT TCCTAGCGGA
CAGTGGCAAG CGTGCCGCGC GTTAGGCATG AATAAAATCG CTACGCTGCG AGTACTGCTG
CCTTATGCAT TACGCAGAGC TGTGCCTGCT TATTCCAACG AAGTGATTCT TGTCTTTAAA
GGCACTTCGC TGGCCAGCAC GATCACCATT ATGGATTTGA TGGGCTACGC GCAGCGCATC
AACGCCCAAA CCTACGATAC GTTGACAGTC TTTGGGATTG CCGGGGCATT TTACCTTGCA
GTGAACGGCA TTCTGACCCT GATCTTCCGC CAAATCGAGA AAAAAGCGTT AGCGTTTGAG
GCGTATTAG
 
Protein sequence
MKEQHLWQLL EGLGTSLQLT AASLLVGCIL SLLMTVSLVM RTPVVHWFSR AVITLFTGTP 
LLVQIFLVYY GPGQFEWIRE SVLWVWLSQP WFCAMLALAL NTAAYSTQLF KGAFNAIPSG
QWQACRALGM NKIATLRVLL PYALRRAVPA YSNEVILVFK GTSLASTITI MDLMGYAQRI
NAQTYDTLTV FGIAGAFYLA VNGILTLIFR QIEKKALAFE AY