Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0698 |
Symbol | artM |
ID | 5133966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 759964 |
End bp | 760632 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640531020 |
Product | arginine transporter permease subunit ArtM |
Protein accession | YP_001215535 |
Protein GI | 147672214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.180995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGC AACACCTATG GCAACTGCTT GAAGGCTTAG GCACCAGTTT GCAACTGACG GCAGCTTCGC TGCTGGTGGG TTGCATATTG TCACTCTTGA TGACCGTAAG CTTAGTGATG CGCACGCCCG TCGTGCATTG GTTTAGCCGT GCGGTGATCA CCTTGTTTAC CGGCACTCCG CTGCTGGTGC AAATTTTCTT GGTGTATTAC GGCCCTGGAC AGTTTGAATG GATCCGCGAA AGCGTACTTT GGGTATGGCT CAGCCAACCT TGGTTTTGCG CTATGCTGGC TTTGGCGCTC AACACTGCGG CGTACAGCAC GCAACTGTTT AAAGGCGCAT TTAACGCCAT TCCTAGCGGA CAGTGGCAAG CGTGCCGCGC GTTAGGCATG AATAAAATCG CTACGCTGCG AGTACTGCTG CCTTATGCAT TACGCAGAGC TGTGCCTGCT TATTCCAACG AAGTGATTCT TGTCTTTAAA GGCACTTCGC TGGCCAGCAC GATCACCATT ATGGATTTGA TGGGCTACGC GCAGCGCATC AACGCCCAAA CCTACGATAC GTTGACAGTC TTTGGGATTG CCGGGGCATT TTACCTTGCA GTGAACGGCA TTCTGACCCT GATCTTCCGC CAAATCGAGA AAAAAGCGTT AGCGTTTGAG GCGTATTAG
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Protein sequence | MKEQHLWQLL EGLGTSLQLT AASLLVGCIL SLLMTVSLVM RTPVVHWFSR AVITLFTGTP LLVQIFLVYY GPGQFEWIRE SVLWVWLSQP WFCAMLALAL NTAAYSTQLF KGAFNAIPSG QWQACRALGM NKIATLRVLL PYALRRAVPA YSNEVILVFK GTSLASTITI MDLMGYAQRI NAQTYDTLTV FGIAGAFYLA VNGILTLIFR QIEKKALAFE AY
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