Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0689 |
Symbol | fabH-2 |
ID | 5134635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 753947 |
End bp | 755035 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531011 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001215528 |
Protein GI | 162329618 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.896722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAT GTTATGCCGA AATCACCGGG TGGGGTAAAT GTCTGCCACC TGCGACGCTC TCCAATCACG ATTTGAGCAC CTTTCTTGAT ACTTCCGATG AGTGGATTCA ATCACGTACT GGGATTGAAC AGCGTCGGAT CAGCCACGTG AATACTTCCG ATCTCGCCAC CGTTGCCGCT CAGCATGCTA TTGCCTGTGC GGGCGTAAGC GTTGAAGAGA TAGACCTGAT TATTGTGGCA ACCTGTTCAC CGGATTCGTT AATTCCCAAT ATTGCTTCAA AAGTGCAGCA AAATTTAGGC ATTCCTTCTG CTGCCGCCTT TGATCTCAAC GCCGCCTGTA CTGGTTTCCT CTATGGTTTA GAAACCGCGA CACGCTTGAT GCAAGCGAGC CATTATCGCC ATGCTTTGGT GATTGGTGCT GAGCGCCTCT CTTTCTATCT GGACTGGACG AAGCGAGACA CCGCCGTGCT GTTTGGAGAT GGCGCAGGTG CTGTGGTATT GAGCAAGACC GAACAAAAAG TGGGCTTGCA AGATGCGCAA ATTGGCTGTG ATGCCCAAGG ACGAGATATT TTAGCGGTAC CTAAGTTTGG AACCGCGATG GATCGTTTTG ATGCAGACAA TGGTTACTGG GCATTTGATT TCGTGGGTAA AGAGATCTTT AAACGCGCGG TGCGTGGCAT GGGTGCTGCG GCGCAGCAAG TGTTGGCGCG TAGCGGCTTA TCGACAGAAG AAATCGATGT GGTGATCCCG CATCAAGCCA ATATCCGCAT TATTCAAACC CTGTGTGATT TGGCGGGCAT CGCGCAAGAC AAAGCCTTTG TGAATATTCA TCGCTACGGT AATACCTCCG CGGCTACGGT GCCGATTGCC CTATGCGAAG CGTTAGAGCA AGGCAAAATC AAACCTCATG ATGATCTGTT GGTCGCCGCT TTTGGCGCAG GGCTAACGTG GGGAGCGGGT CATATTCGCT GGGGTGAGCG GGTAACGCCT CTGGGTAAAA GTGATGCGCA ATTGCCTTCT TGTGATCACA CTGCGTTAGA TCTGTTGAGC AAGGCGATCG AACACTGCAA GCGTCATCAA TCAGAATGA
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Protein sequence | MTQCYAEITG WGKCLPPATL SNHDLSTFLD TSDEWIQSRT GIEQRRISHV NTSDLATVAA QHAIACAGVS VEEIDLIIVA TCSPDSLIPN IASKVQQNLG IPSAAAFDLN AACTGFLYGL ETATRLMQAS HYRHALVIGA ERLSFYLDWT KRDTAVLFGD GAGAVVLSKT EQKVGLQDAQ IGCDAQGRDI LAVPKFGTAM DRFDADNGYW AFDFVGKEIF KRAVRGMGAA AQQVLARSGL STEEIDVVIP HQANIRIIQT LCDLAGIAQD KAFVNIHRYG NTSAATVPIA LCEALEQGKI KPHDDLLVAA FGAGLTWGAG HIRWGERVTP LGKSDAQLPS CDHTALDLLS KAIEHCKRHQ SE
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