Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0676 |
Symbol | |
ID | 5134740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 744320 |
End bp | 744970 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530998 |
Product | multidrug resistance protein A |
Protein accession | YP_001215515 |
Protein GI | 147672056 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.545698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC AACTCTCCCC ACTCGAAGCC CGTGTAATTG GCTGTTTAAT TGAAAAAGAA GTCACCACGC CCGATCACTA TCCACTGACA CTCAATAGCT TAACCACCGC TTGTAACCAA AAAAGCAATC GCGAACCGGT ACTCAACTTG AGTGAAGCGG AAGTGCAAGA CACGGTGGAA GGGTTAATCG CTCGTCGCCT TGTAAGCGAT GAAAGCAGCT TTAATAGCCG TACCAGCAAA TACCAACACC GCTTCTGTAA TACAGAGTTT GGCGATCTCA AACTCAATCA ACAAGAACTC GGACTCATCT GCTGCTTATT GCTGCGCGGT GCGCAAACCC CCGGAGAGCT GCGCACGCGA ACCAATCGAC TCTGTACATT TACCGATGTG AAAGAGACTG AAGCGGTACT TGAGCGCTTA GCGAATCGTG ATTCAGGTGC GCTGGTGGTG AAATTGCCGC GTGAGCCGGG TAAGCGTGAG TCCCGCTACC ATCATCTGTT TTGCGGTGAA GTGGATATGG CGGCTTTTGC CACGAGCTCA GACAATGAAG CGAACGCCTC TTCTCAATAC GCTGAGCTAG AACAAGAAGT GGCAGCACTG CGTGAAGAAG TGGCCGAGTT GCGCGCACTG ATTGAACGAC ATTTAGGCTA A
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Protein sequence | MNIQLSPLEA RVIGCLIEKE VTTPDHYPLT LNSLTTACNQ KSNREPVLNL SEAEVQDTVE GLIARRLVSD ESSFNSRTSK YQHRFCNTEF GDLKLNQQEL GLICCLLLRG AQTPGELRTR TNRLCTFTDV KETEAVLERL ANRDSGALVV KLPREPGKRE SRYHHLFCGE VDMAAFATSS DNEANASSQY AELEQEVAAL REEVAELRAL IERHLG
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