Gene VC0395_0672 details

Gene Information

• Locus tag: VC0395_0672
• ID: 5133925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 738154
• End bp: 738864
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640530993
• Product: hypothetical protein
• Protein accession: YP_001215510
• Protein GI: 147671666

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTATAACT TTGTCAATAA TAAAAACAAG TTAAGAGTTT TTTGCATGGC TGTCGGTTCT 
GAAGATCTGA ATAAACTGGC GTTGCTTTTA AAACCGGGGA TGAAGGTATC GGCTGAAATT 
CATTTCGGCC CTGAAGATAC TTATGCGTTC CACACCACCC TGATTGGCCA CAAAATTGAG 
CAATATATTG TGCTGGATCT GCCGCTCAAG GCGCATCAAG CCTTGGTGAT GCGTAAACTC 
AAGAATGTCG CGATCGTCTT ACGCGGTATG TGCGACACTG AATTGGGGCA TATTTTGGCG 
TTTCAAAGTT CCATTTTGCA GCCCAGCACT AAGCCTTTCT GTGTTTTGTT TATTCGACCA 
CCCAAACATT TTGCGACCAA AGCGATTCGT AGCCATGAAC GTTATAAAGT GGCGATCCCG 
GCTGAAGTGA GTGAAGACAA CAAAAACTAT GCCGGCACGT TAGTCGACTT TTCCATTTCA 
GGTTGCGGGG TGTTTATTCG TGGTGAAAAT GAGCTCCATA TGGGCTCTAA AGTGCGAATT 
AATAGTGAAC TCGACCCCTT TCTGCCGAAG CGGCTCAAAA GCCATATCGT CAATATTCGG 
CGTAAATCGA ATGGGCATTT GATCGGCATT CAGTTTGAAC AACCGATCAC TTTGACGGAA 
ACGCTAAAAA AACAGGTTCT CGAACACGCT TTTCTCGCTG GCTCAATTTA A 

 

Protein sequence

MYNFVNNKNK LRVFCMAVGS EDLNKLALLL KPGMKVSAEI HFGPEDTYAF HTTLIGHKIE 
QYIVLDLPLK AHQALVMRKL KNVAIVLRGM CDTELGHILA FQSSILQPST KPFCVLFIRP 
PKHFATKAIR SHERYKVAIP AEVSEDNKNY AGTLVDFSIS GCGVFIRGEN ELHMGSKVRI 
NSELDPFLPK RLKSHIVNIR RKSNGHLIGI QFEQPITLTE TLKKQVLEHA FLAGSI