| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0671 |
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| Symbol | luxQ |
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| ID | 5134892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 738856 |
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| End bp | 741429 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530994 |
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| Product | sensor histidine kinase LuxQ |
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| Protein accession | YP_001215511 |
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| Protein GI | 147672178 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACATTC GACCTAGCCA AATCAAGCAT AAACAGCGCA TCGCTTCATT TATCACCCAT
GCTGTCGTGG TGGTGATGGG CGTTCTGATC GTCAGTGTAT TATTCCAAAG TTACCAGATC
AGTAGCCGCT TGATGTCTCA AGAAAGGCAA CGCACCTCAG TTCAAACCTC CAGCTTGATT
CAAAGTTTGT TTGATTTTCG TCTTGCGGCA CTGCGAATTC ACCAGGACAG CACAGCCAAG
AACGCCAGTT TAATCAACGC ACTTGTCAGC CGAGATTCGA GTCGGCTGGA TGAATTCTTT
TCGAGTGTCG ATGAACTTGA ACTTTCTAAT GCGCCAGATC TGCGTTTTAT CTCCAGTCAC
GACAACATCT TGTGGGATGA TGGCAACGCC TCTTTTTACG GCATTGCCCA GCAAGAGCTG
AATAAGCTTA TCCGCAGAGT GGCGATCAGT GGCAATTGGC ACTTGGTTCA AACGCCCAGC
GAGGGAAAAT CAGTCCATAT TTTGATGCGT CGTTCATCAC TGATTGAAGC GGGAACCGGG
CAGGTTGTTG GGTATCTGTA TGTAGGCATC GTACTCAATG ATAACTTTGC GCTGTTGGAA
AATATCCGCA GTGGCAGTAA CTCAGAAAAC CTAGTCCTTG CCGTCGATAC TACGCCGCTG
GTTTCTACCT TGAAAGGCAA TGAACCTTAT TCGCTGGACT ATGTGGTGCA CAGCGCCAAA
GATGCTATGC GCGACAGCTT TATTGTTGGG CAAACCTTCT TAGAAGTGGA AAGTGTACCG
ACCTATCTGT GCGTCTACTC GATTCAGACC AACCAAAATG TGCTCACCCT GCGGGATAAT
TTCTATTTTT GGATGGCGTT TGCGCTGATC AGTATGATCG GTGTTTCCAT CGCGTCACGC
TGGTGGCTAC AAAAACGCAT TCAGCGTGAA ATTGAAACCT TGATGAATTA CACCCATAAA
TTGATGGATC TGGATACGAA AAGTGAGTTT ATCGGTTCAA AAATTTATGA GTTCGACTAT
TTTGGGCGAA CGTTGGAACA ATCATTCCGT CGTCTCGCCA ATAAAGAAAA GCAGTTTGAA
GATCTGTTTA ACTTTGCGCT CTCACCGACC ATGCTTTGGA ATACCTCTGG TCGGCTGATC
CGCATGAACC CCTCAGCGCA AATCCAGTTT TTGCGCGAAG ATGCGCAAAA CCATTTCTTA
TTTGAGATTC TTGAACGCCA ACTGTTGCCG ACCATCACTA AGGCGGCACA GGGCGATAAT
CCGAGTGACG TCACAACCGA AGTGGATGGT CGTGTGTACC GCTGGAACCT TTCGCCGATC
ATGGTGGAAG GGCAGATCAT TTCCATCATT ACTCAGGGGC AAGATATCAC CACCATCGCG
GAAGCGGAGA AACAAAGCCA AGCCGCAAGG CGCGAAGCGG AAGAGTCGGC ACGGGTCAGA
GCCGAGTTTT TGGCCAAAAT GAGTCACGAA TTGCGCACGC CGCTCAATGG TGTGCTCGGT
GTTTCCCAAC TGCTAAAACG GACCCCACTC AATGATGAAC AGCGCGAACA CGTGGCTGTG
TTATGCAGCA GTGGTGAACA TTTGCTCGCG GTGCTGAATG ACATCTTGGA TTTTTCACGC
TTAGAGCAGG GCAAATTCCG TATTCAAAAG AATGAGTTTC GCCTTAAAGA GTTGGTGTGC
GCGATTGACC GCATTTATCG ACCTTTATGT AATGAAAAAG GCTTGGAACT GGTGGTGAAT
TCCAATATCA CCACCGCAGC GATTGTGCGC AGCGATCAGA TCCGGATTAA CCAAATCTTG
TTCAATTTGC TCAATAACGC GATCAAGTTT ACTCACCAAG GTTCGATACG TGTCGAATTG
CAATTAATTG AAGGCGATCC GTTAGCTCAA CTGGTGATTC AAGTCGTCGA TACGGGGATT
GGTATCCGCG AACAAGATTT AACGGTGATT TTTGAACCTT TCATGCAAGC TGAATCGACC
ACCACTCGAG AGTACGGCGG AAGTGGTTTA GGCTTAACGA TTGTGCACAG CTTAGTGGAA
ATGCTCAGTG GTCAACTGCA CGTCAGCTCC GAGTATGGCA TTGGTACACG TTTTGAAATT
CAGTTACCGA TTGAGCTGGT AGAAAAACCG GATGCGCCGC AGCAGTTGTT ACCAGCTCCT
GATCCTCAAC CGTTATTTGA TAAAACTCTG CGTGTACTGT TGGTGGAGGA TAACCACACC
AATGCCTTTA TTGCTCAAGC ATTCTGTCGT AAATATGGCT TAGATGTGAG TTGGGTAACC
GATGGACTAC AGGCGATTGA AGAGCTCAAA ATACATGACT ACGACTTAGT GCTGATGGAT
AACCAGTTAC CCTATTTGGA TGGCGTTGAG ACCACGCGCA CCATCAAAAA GGTGCTGCAT
CTTCCGGTGG TGGTGTATGC CTGTACTGCG GATGGCTTAG AAGAAACACG GCAAGCATTT
TTCCATGCGG GCGCGGAATA TGTGTTAGTG AAGCCACTGA AAGAGCAGAC TTTGCATAAA
GCGCTGGAGC ATTTCAAACA TCATCATGGC CAAAAAAACG CTGGCTTAAA TTGA
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| Protein sequence | MNIRPSQIKH KQRIASFITH AVVVVMGVLI VSVLFQSYQI SSRLMSQERQ RTSVQTSSLI
QSLFDFRLAA LRIHQDSTAK NASLINALVS RDSSRLDEFF SSVDELELSN APDLRFISSH
DNILWDDGNA SFYGIAQQEL NKLIRRVAIS GNWHLVQTPS EGKSVHILMR RSSLIEAGTG
QVVGYLYVGI VLNDNFALLE NIRSGSNSEN LVLAVDTTPL VSTLKGNEPY SLDYVVHSAK
DAMRDSFIVG QTFLEVESVP TYLCVYSIQT NQNVLTLRDN FYFWMAFALI SMIGVSIASR
WWLQKRIQRE IETLMNYTHK LMDLDTKSEF IGSKIYEFDY FGRTLEQSFR RLANKEKQFE
DLFNFALSPT MLWNTSGRLI RMNPSAQIQF LREDAQNHFL FEILERQLLP TITKAAQGDN
PSDVTTEVDG RVYRWNLSPI MVEGQIISII TQGQDITTIA EAEKQSQAAR REAEESARVR
AEFLAKMSHE LRTPLNGVLG VSQLLKRTPL NDEQREHVAV LCSSGEHLLA VLNDILDFSR
LEQGKFRIQK NEFRLKELVC AIDRIYRPLC NEKGLELVVN SNITTAAIVR SDQIRINQIL
FNLLNNAIKF THQGSIRVEL QLIEGDPLAQ LVIQVVDTGI GIREQDLTVI FEPFMQAEST
TTREYGGSGL GLTIVHSLVE MLSGQLHVSS EYGIGTRFEI QLPIELVEKP DAPQQLLPAP
DPQPLFDKTL RVLLVEDNHT NAFIAQAFCR KYGLDVSWVT DGLQAIEELK IHDYDLVLMD
NQLPYLDGVE TTRTIKKVLH LPVVVYACTA DGLEETRQAF FHAGAEYVLV KPLKEQTLHK
ALEHFKHHHG QKNAGLN
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