Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0667 |
Symbol | |
ID | 5134546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 733328 |
End bp | 735994 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640530989 |
Product | DNA repair ATPase |
Protein accession | YP_001215506 |
Protein GI | 147672427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGCT CAATTTGGAC TAAATGGGAT TTACATATTC ATTCTCCATA TACACATCAA GCAAACGAAT TCGGCAGTAC CACAATAGAT GAGTTTGTTA ATAAGGTGAT TTCTTCAAAC CTCAGTCTGA TTGCTATAAC TAATTACTTC TTTTTTAAAG AAGATGAACT AGATGAAATT AGGGATAAAT TTAAGGAAAA AGGTGCTGAA GTCACGGTTT TAGGTAATCT CGAATTTCGT ATTGACCAAC AAAATAAAGA AGGCGAATGG ATCAATGTGC ATTGTATTTT TTCGGAAAAT ATTACCACTC GCAAGATAAA TACCATTCTG TCTACCCTCC CAATTTCTAA CACCACCGCT GAACGAAAAA GTATTTATTG CTCACAGCTG TCTTTATCTG ATGCCCAAAC TAAAATTTCT GAAGTGATGG TGAATTTCGA TGGGCTAATT CAGCATTTGA ATAGAAACTT AAAATTTGGA GTAGATTTCT TGATTGCTGC CTGTCCAAAT GGTTATGGTG GATTTAGACC TGACGTAACT GAAGGGCGGT CTTTGGCTGC TGCATTAGAA ATAGAGAAAA GGTGCCAAAT CATACTTGGA AGACCTCAAG ATCGGCCGTT TTTTCTGGAT CAAAACAGAT ATCAATCTGC TATACAAAAG CCCGTTTTTT TTGCTTCTGA CTCCCATAAA TTAGAAGAAA TTGGAAAAAA ATACTCTTGG GTTAAAGCTA AGCCTACATT TGAAGGTTTA AGACAAGCCA TTATTGAACC AGATTTAAGA GTTCAGCAAA CTGACGATTT TGTTGAAAAA ACGTATATTA AACCATGGTT TAAATCGGTT GAACTAGGCG GGAAGGTTTT TGAAGGTGAG GAAATTACTT TCTTAAGTCA GAAAATTCCA CTAAACCCCA ACCTTATTAC GATAATTGGT GGGAGAGGGA CGGGTAAAAG CCTATTTTTA GATGCGATGC ACTCAAGGTT TAATCATCGG GCTGAGCACT CTAATGCACG AAAAGTTAGC GGTGAAAGTC TTTGTGTTGA GTTAGATCAG GGCGATGGAA CAGTGCTGAA ATTTGATTCT TCGGCAAACA CCTATTCCTA TTTGCATGTA TCACAAGGAG ATGTTCAGCA TTTTAGCCAA AAGCCTGATG ACTTGAGTGA CGAAATCAAA AGAATGCTAG GAATACATGG TATTCAATTT GATTCAGTTG CCAGCTCTGA AATAGTTAAC AATTTAAGCA AGTACCAAAC ATTCGTTCAA TATTGGGAAG ATACTGATTC ACAAGGGCAG CGAATAAATA CACAAGGTTA CCAACAAAGT GTTATTGATA GTAACACTCA GTTAATTGCT ACACTTACTA ATCCTCAGAA CAAATTACTT ATTGAAAGTT ATCAGAAAAA CTCAAAAAGT ATTAATGAGA AGAATAGATT CATTGAAGAG GCAAGAAATA TGGTAGCTTT AATTAATCGT TACGCTACCG AATTAAATCA AAAGATTGCA CTCTTAAACT CAAACGCTTG CTCAGTAAAT CAGTCACCTT TAGTTGATGA GTCTATATTC AAAGATCCAA TAAATGAAAA TATTAAAAAC TGCAAGGATG AAATGGTAAT TCTGGAAGAT AATAATAAAG AAATAGCTCT TCAATTTCAG AAGCAAGGCA TCAGTCAAGA TATTTCATCC CTGCTTGGAA AAGTAACAGA ATATCAAAAA TCTATAGATC AAGCGTCAGC AAAATTGGTA GAGATAAATC AGAAAACTTC TGAATATCAT GAGTACGTTC AGAAGCGTGG CGAGCTGGCA CTTAGCTATA AAAATTACCT AAATAGCCAA AAAGAAAGTA TCGATAATGC ATTTCAAAGA CTCAAGGTGA AACAGCCGAG TTGGAATGAT GAACAAAATG ATTTGGTTCA GAATATTCTT GTCGATATAA ACATCAATGG TAGAGTGGTA TTTAATGTAG AGCAGTTTTA TGCAGGGATT GAAGAGTGCT TAAATAAAGG TAAGTTTAGG AACACAAGTG AAAAATCCAC CTTTGAAAGG TTGCAAGAAA CTTTTTGTGT TAAATCAATC GATGACTTAT TCAAGCTTGT GGCAGGTGAA AAAATAATTA ACTGTGATGG CACCCCGACA AGTATCGAAG AGTTTTTTTG GAAACCTGAA TATTTTAACA AAGGTGGGCG GTTCGAGCTG CTGAGTTACC TATATATACC TTCAAATATT AGAAAATATC TTTATGTAAA TGCTGACTTC CAATACAAAG GGAAAGAAGT AAATAAACTG TCAGTAGGTC AACGAGGTAC TTTTTACGTA TGTTTGAAAT TAGCTACGGA TCCATTCGGC AGTCCATTTG TCTTTGACCA ACCTGAGGAT GATCTTGACA ACGAGTTTAT TATGGCTCAG CTTGTGCCAC TATTTAGAAA AATAAAGAAA TATCGACAAG TAATTATTGT TACTCATAAT GCTAATCTGG TCGTTAATAC TGACGCTGAG CAAGTTATCG TTGCTGATAA TCAGGGCGAA AATATACGTT ACAGAGCTGG TTCTGTTGAA GACGGTAATG TCAAAGATAA TTCAGGGATA AGAGCTGATA TTTGTAACAT TCTGGAAGGC GGGAGTTATG CTTTTGAGAA AAGAGAGAGA AAATACGGTA TCCAAGAATT TGCCTAA
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Protein sequence | MIGSIWTKWD LHIHSPYTHQ ANEFGSTTID EFVNKVISSN LSLIAITNYF FFKEDELDEI RDKFKEKGAE VTVLGNLEFR IDQQNKEGEW INVHCIFSEN ITTRKINTIL STLPISNTTA ERKSIYCSQL SLSDAQTKIS EVMVNFDGLI QHLNRNLKFG VDFLIAACPN GYGGFRPDVT EGRSLAAALE IEKRCQIILG RPQDRPFFLD QNRYQSAIQK PVFFASDSHK LEEIGKKYSW VKAKPTFEGL RQAIIEPDLR VQQTDDFVEK TYIKPWFKSV ELGGKVFEGE EITFLSQKIP LNPNLITIIG GRGTGKSLFL DAMHSRFNHR AEHSNARKVS GESLCVELDQ GDGTVLKFDS SANTYSYLHV SQGDVQHFSQ KPDDLSDEIK RMLGIHGIQF DSVASSEIVN NLSKYQTFVQ YWEDTDSQGQ RINTQGYQQS VIDSNTQLIA TLTNPQNKLL IESYQKNSKS INEKNRFIEE ARNMVALINR YATELNQKIA LLNSNACSVN QSPLVDESIF KDPINENIKN CKDEMVILED NNKEIALQFQ KQGISQDISS LLGKVTEYQK SIDQASAKLV EINQKTSEYH EYVQKRGELA LSYKNYLNSQ KESIDNAFQR LKVKQPSWND EQNDLVQNIL VDININGRVV FNVEQFYAGI EECLNKGKFR NTSEKSTFER LQETFCVKSI DDLFKLVAGE KIINCDGTPT SIEEFFWKPE YFNKGGRFEL LSYLYIPSNI RKYLYVNADF QYKGKEVNKL SVGQRGTFYV CLKLATDPFG SPFVFDQPED DLDNEFIMAQ LVPLFRKIKK YRQVIIVTHN ANLVVNTDAE QVIVADNQGE NIRYRAGSVE DGNVKDNSGI RADICNILEG GSYAFEKRER KYGIQEFA
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