Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0658 |
Symbol | |
ID | 5134677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 724752 |
End bp | 725699 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530980 |
Product | sensor histide kinase |
Protein accession | YP_001215497 |
Protein GI | 147671924 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCG AAGCGCAATA TCAACGCATT TACGAGCGAG AACGTAAAGC TCGGATCCTC GCGGAAAAAC TCCTTGAGGA GAAAAGCCGC GCCTTGTACG ACAAAGTGCT GGAGCTGCAA TCCACGTTAG AGCAGTTGAA TGGCGCTCAG GCGCAGCTAT TGCAGTCAGA AAAAATGGCG TCAGTCGGTC AGTTGGCCGC TGGGGTCGCC CATGAAATCA ATAATCCGAT TGGATTTTGT CTGAGTAATT TGAATACCTT GCGTGATTAT ACCGAGGTGT TTGCTCAGTT AGCGGATTTC GTTGAGCAGT CAGCGCCAAG TTTTGAAGGC AGTGAGTTTT ATCAAGCTTG GATGCGCTTT AAACAGCAGC ATGATTTGGC GTTTGTGCGC GAAGATGTGC TCAGCCTTGT CGAAGAAAGT GCCAGTGGTT TGCATCGGGT TAAAGACATT GTCACTAGCC TACAAAGTGT CTCGCACAGC AGTGATGGCC GTTTTGCGGA ATGCAATCTC AACGACTGCA TAGAATCGGC ACTGCGCATT GTGTGGAATC AGTTTAAATA CACCATGCTG GTTGATCGGC AACTCGCTGA GAATCTACCC AAGATCAAAG GGATTGCCCC TGAAATACAG CAGGTGCTGA TGAATATGTT CATCAATGCT TCCCACGCTT GTGATGAGCA CGGCGAGTTA ACCATTACCA CCGATACCTT GAATGAGAAG GGCAAAGCTT GGGTACAGGT GCAAATTGCG GATAATGGCC ATGGGATTTC ACCAGAACAC TTAGCCAAAA TTTTTGACCC CTTTTTCACC ACCAAACCGG TCGGGGTTGG AACCGGGCTG GGGTTATCCA TCGCGTTTGG AATTGTGGAA AAACATCAAG GTAAGATCTC GGTGACCTCA GAAGTGGGGC AGGGAACACG GTTTACCTTA TTGTTCCCTG CGATCTGA
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Protein sequence | MSAEAQYQRI YERERKARIL AEKLLEEKSR ALYDKVLELQ STLEQLNGAQ AQLLQSEKMA SVGQLAAGVA HEINNPIGFC LSNLNTLRDY TEVFAQLADF VEQSAPSFEG SEFYQAWMRF KQQHDLAFVR EDVLSLVEES ASGLHRVKDI VTSLQSVSHS SDGRFAECNL NDCIESALRI VWNQFKYTML VDRQLAENLP KIKGIAPEIQ QVLMNMFINA SHACDEHGEL TITTDTLNEK GKAWVQVQIA DNGHGISPEH LAKIFDPFFT TKPVGVGTGL GLSIAFGIVE KHQGKISVTS EVGQGTRFTL LFPAI
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