Gene VC0395_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0658 
Symbol 
ID5134677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp724752 
End bp725699 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content49% 
IMG OID640530980 
Productsensor histide kinase 
Protein accessionYP_001215497 
Protein GI147671924 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCG AAGCGCAATA TCAACGCATT TACGAGCGAG AACGTAAAGC TCGGATCCTC 
GCGGAAAAAC TCCTTGAGGA GAAAAGCCGC GCCTTGTACG ACAAAGTGCT GGAGCTGCAA
TCCACGTTAG AGCAGTTGAA TGGCGCTCAG GCGCAGCTAT TGCAGTCAGA AAAAATGGCG
TCAGTCGGTC AGTTGGCCGC TGGGGTCGCC CATGAAATCA ATAATCCGAT TGGATTTTGT
CTGAGTAATT TGAATACCTT GCGTGATTAT ACCGAGGTGT TTGCTCAGTT AGCGGATTTC
GTTGAGCAGT CAGCGCCAAG TTTTGAAGGC AGTGAGTTTT ATCAAGCTTG GATGCGCTTT
AAACAGCAGC ATGATTTGGC GTTTGTGCGC GAAGATGTGC TCAGCCTTGT CGAAGAAAGT
GCCAGTGGTT TGCATCGGGT TAAAGACATT GTCACTAGCC TACAAAGTGT CTCGCACAGC
AGTGATGGCC GTTTTGCGGA ATGCAATCTC AACGACTGCA TAGAATCGGC ACTGCGCATT
GTGTGGAATC AGTTTAAATA CACCATGCTG GTTGATCGGC AACTCGCTGA GAATCTACCC
AAGATCAAAG GGATTGCCCC TGAAATACAG CAGGTGCTGA TGAATATGTT CATCAATGCT
TCCCACGCTT GTGATGAGCA CGGCGAGTTA ACCATTACCA CCGATACCTT GAATGAGAAG
GGCAAAGCTT GGGTACAGGT GCAAATTGCG GATAATGGCC ATGGGATTTC ACCAGAACAC
TTAGCCAAAA TTTTTGACCC CTTTTTCACC ACCAAACCGG TCGGGGTTGG AACCGGGCTG
GGGTTATCCA TCGCGTTTGG AATTGTGGAA AAACATCAAG GTAAGATCTC GGTGACCTCA
GAAGTGGGGC AGGGAACACG GTTTACCTTA TTGTTCCCTG CGATCTGA
 
Protein sequence
MSAEAQYQRI YERERKARIL AEKLLEEKSR ALYDKVLELQ STLEQLNGAQ AQLLQSEKMA 
SVGQLAAGVA HEINNPIGFC LSNLNTLRDY TEVFAQLADF VEQSAPSFEG SEFYQAWMRF
KQQHDLAFVR EDVLSLVEES ASGLHRVKDI VTSLQSVSHS SDGRFAECNL NDCIESALRI
VWNQFKYTML VDRQLAENLP KIKGIAPEIQ QVLMNMFINA SHACDEHGEL TITTDTLNEK
GKAWVQVQIA DNGHGISPEH LAKIFDPFFT TKPVGVGTGL GLSIAFGIVE KHQGKISVTS
EVGQGTRFTL LFPAI