| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0656 |
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| Symbol | helD |
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| ID | 5134548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 720315 |
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| End bp | 722414 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530978 |
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| Product | DNA helicase IV |
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| Protein accession | YP_001215495 |
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| Protein GI | 147671874 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCG ACAACTTTGT TAGTGGGCTT TTACCAATGC AGCTGAATGC GAATAAGACT
GCACAATTTT TTATTGCCAA TGAATATTAC CAAGTCCAGC TTGAGAAAGA GTGGTTGGTG
TTAACTTCGC TCAGTAGCGA AGAACGTATT CCCTTTCATG TCTGGAACGG TGAAGTGCAG
ATCCGCAGAG GCGTGTTTTG GGGAACGTTG CAGTTTTTTG CTCATCCCGA AGAGGGCGTG
CAGCGCAGTT GGCTGGTACA AGGTCTTCCT TGGCCGGAGT GTCGCCATTT TGCGCACCAA
TTAGTGGCGC ATTATCAAGC GTGGCACAAT CGCCAATGTG AGCAATTAAG TCTCTATTTT
CCGCGTTGGC AGCAAGAGTT GTCTCGTCTA AAGCGCCTGC CGTCTTTTCT ATCCCACTCC
TCCGTTGAAG CTTGGGTCGC GCAAGTGTAT GCCGATTTAA AACTGATGGA CATGACGCTG
CATGAAGCGC AAAAACATCT TCCCACGGTT TTCGATACCT TACTGCCTTG GCTGCTCGAT
ACCTCCGCGA CGCTGTATGA GCGTAATAAA GCTTGGCTAG AGATAGAACG CGCGAACTGG
ACAGTCTTGT TTTCCCAGTG TGAATCGTCG CCGCTCAATG TCTCGCAGCA ATACGCTGTG
CTGCTGAATG ACGATCATAA CTTAGTGTTG GCGGGCGCAG GTTCAGGTAA AACCAGCGTA
CTGACTGCGC GCGTTTCCTA TTTATTGCAG AGCCATTTGG CGAAACCAGA GCAAATTTTG
TTGGTCGCTT TTGCACGCGA TGCGGCACAA GAGATGGCCG AGCGCTTAAA AAACAAAATT
GGTTTGGAAG CTGAGCGTTT GCACATCAAT ACCTTCCATC AGTTGGGTCT GCGCATTATC
AACCGAGTGG AAGGCAAAAC GGTGATCATG TCGCCACTCG CGAATGACAG CAAACTCAAG
CAGGCTTGGT GTATTGATTG GTTAAAGCGC CACTGGATGA CCCCGACCAA TTTTAAACGC
TGGCAAAAAC ATCTCGCCAA ATGGCCGATT GCGTATCTGG CAGGGGATGA TGAGCTGGGT
AGCCACGTCG AAAACCCGAA ATTGATCGCA TGGCTCGAGA AGCAGCTCGA TCAATTGGCA
CAAATGGGAT TGAGTAAAAA AGAGCTGCAA GAGCGGCTGG TGGATCACGA TGACTATCCA
CGCTTAAACA GCGAGCTTTC CTTATGCTGG CCGTGCTATC AAGCGTGGCA GCAGATGCTT
AAAGATCAAA ACCAAATTGA TTTCAACATC ATGATCACTA GAGCGACCGA GTATGTCGAA
AAAGGCAAAT TCCGCTCGCC GTGGAAATTT ATCATGGTTG ATGAGTATCA AGACATCTCG
CCGCAGCGTT TACGCTTGCT ACAAGCGCTG TGTGAGCAAA ACCAAGGCCA GTGTAACCTG
TTTGCGGTCG GTGATGATTG GCAATCCATC TACCAATTTG CGGGTTCCGA TGTGGATTTG
ACCACCGGTT TTGCGTCGCG TTTTGCGCAT TCGACGGTGC ACCATCTCGA TACTACTTAT
CGTTTTAATG ATCAGATTGG TGCGGTCGCC AACCGCTTTA TTCAGCAAAA TCCGCATCAG
TTACCCAAAA CGCTCAATAG CTTTAAAACC CAGAAGCAAA AAGCGGTCAT GCTGGCACCG
AACCATTCGG TTGAAAAAAT ATTGGATGAA ATCAATCGCT CCACCAATAA GCTGAAAACC
GTGCTACTGC TTGGTCGTAA TCACTACCAT AAACCTGAAT TACTGAAAGA TTGGCAGAAT
CGCTATCTCT CTCTCAAGCT CGATTTTATG ACTTGCCATG CCAGCAAAGG CAAAGAGGCG
GATTATGTGA TTATTTTGGC GGTCGATGAA GGCCAATTCC CCGCTCGCGT GAAAGCTTTG
CATTTGGATG ATGCGTTGAA TCAAAGTGAG GATGATTTCC CGTATGCCGA AGAGCGGCGC
TTATTCTATG TCGCGTTGAC TCGTGCCAAA GAGAAAGTGT GGGTGACTTA TAACGGCAAC
GGCTCCAGCT TTGTTCAAGA GCTGTTGAAT GATGACTATC CGGTTGTTAA GCAAAAATAG
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| Protein sequence | MIADNFVSGL LPMQLNANKT AQFFIANEYY QVQLEKEWLV LTSLSSEERI PFHVWNGEVQ
IRRGVFWGTL QFFAHPEEGV QRSWLVQGLP WPECRHFAHQ LVAHYQAWHN RQCEQLSLYF
PRWQQELSRL KRLPSFLSHS SVEAWVAQVY ADLKLMDMTL HEAQKHLPTV FDTLLPWLLD
TSATLYERNK AWLEIERANW TVLFSQCESS PLNVSQQYAV LLNDDHNLVL AGAGSGKTSV
LTARVSYLLQ SHLAKPEQIL LVAFARDAAQ EMAERLKNKI GLEAERLHIN TFHQLGLRII
NRVEGKTVIM SPLANDSKLK QAWCIDWLKR HWMTPTNFKR WQKHLAKWPI AYLAGDDELG
SHVENPKLIA WLEKQLDQLA QMGLSKKELQ ERLVDHDDYP RLNSELSLCW PCYQAWQQML
KDQNQIDFNI MITRATEYVE KGKFRSPWKF IMVDEYQDIS PQRLRLLQAL CEQNQGQCNL
FAVGDDWQSI YQFAGSDVDL TTGFASRFAH STVHHLDTTY RFNDQIGAVA NRFIQQNPHQ
LPKTLNSFKT QKQKAVMLAP NHSVEKILDE INRSTNKLKT VLLLGRNHYH KPELLKDWQN
RYLSLKLDFM TCHASKGKEA DYVIILAVDE GQFPARVKAL HLDDALNQSE DDFPYAEERR
LFYVALTRAK EKVWVTYNGN GSSFVQELLN DDYPVVKQK
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