| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0648 |
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| Symbol | torS |
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| ID | 5134518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 713379 |
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| End bp | 716333 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530970 |
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| Product | sensor protein TorS |
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| Protein accession | YP_001215487 |
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| Protein GI | 147672464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTCG CCAAAGCCAG TATTGGTCGC AAGCTCTTAT TTTCTTTTAG CGCGATGGCG
TTGCTCGTGC TTCTCTCGGC GCTGATCGGC GTTCTAGGTT TTTCTCTGGT TGCCAAAACC
GAACGTGATG TGGTCAATAA TGCCATTCCT TCGATGATCG AGGCGCGCCA AGTCGCTGAG
CTCAGTCATC AAATCATTGC TTCTGTACAG ACTCTTTCTA ACGCCAAAAA TGAGCAAGAA
CACCAAGCCG CTGGACAGAA GGTTTTCTCG CAATTAGAAA CGTTGCTCAC TCATATCCAG
CAACTGGGAG AAGAGGCGTT TGATAGCGTG TTGCTGGATA GATTAGAGCA AGACGTACAG
AACGTGATTG ATACACTGGC GCAATTAGGA CGGCGCGTTG AGCACCGACT CACCTTGGAG
AGCCAATTGA GTACAAGCGT CAAAGAGATG CGCAAATTGG CACAAGAGCT GGAGCAGCTA
ACCCGCACCC AAGTGCTCAA CACCAGCACG ATTGCAATCG CCAATGTCAC GCACATCTAC
GATTTATTGC AAAAGCAGCA GCAAGCGCAG GTTTATCAGG CGTTAGACAA TCTGGTGGAA
GTCGATTTGG ATTTAGCGGA ACGCTTACAT GAGCTGCATC TGTTGGCGTT TAAAGTGCTC
AATGAGATAG AAGAGACGCA AACCGTGACC GATTTAGAGC GGATTTTGGC GTTAGATAGC
GAATTTGCCG CCAACTTGAG CATTATGCAG CGCCGTGTGC AAGCGGTGGA AGACCCAACG
CGCTCCAAAC AAATGGTGAG CTTGCTGAGA GGGTTGGAGA AGCGCCGAAT CGTATTCGAA
CTATTGAAAC AGCGCTACAG CAATGAACAA GTCGCGCAGC AATTACAGCA CGATACCTTG
ACCCAATTTG CCAAGCTCAA TAACACGGTC AATCAGCTGG TGGATGCGTC AAATCAAGTG
ACCACCGCAG CGGTGAGTAA ACTCTCTAAC ACCCTCTATT ACGCGCAATT GATCCTCACC
GTGCTGGGTT TACTCGGCCT TGTGATTGTG GTGTGGATCG TGTGGAAGGT CGTTTATCGC
TCGGTCATCC AGCGTCTCGA TCAACACACC GCCGCGCTGA TCTCGGTGGC AAAAGGGCAA
CTCGACGTCG ACGTTTCAAC TCAAGGAAAT GATGAACTGG GTCAGATGGG GCAGGCGATT
GCCCATGCGC GCGATACCGC CAAAGCGCTT AAAGTGGTGG CAGAGAGTGA AGTATTAGCC
AAACGCGAGT TGCAACAGCA CAAAGAACAT TTGGAAGAGT TGGTTGAACA GCGTACATGT
CAATTGAGCG AGATGAACCA TAAGCTCAAT CAAGAGGTGC TGAACCACGC CAAAGCGCGC
CAGCAAGCGG AGCAGGCCAG CCGTGCCAAA TCCGCTTTCT TGGCCACCAT GAGCCATGAA
ATTCGCACTC CGATGAATGG GGTGTTAGGT ACGGCGCGTC TACTGCAAGA TACCACGCTG
ACTTCCACTC AGCAGCACTA TGTACAAGTG ATTAACCGCA GCGGACGGTC GCTGCTGGCG
ATCCTGAACG ACGTGCTCGA TTACTCCAAA ATCGAAGCGG GGCATCTGGA AATCCATCAC
ACTCATTTTG ATTTGTATCG ATTAGTGAGT GAAACCCATG AGCTGATGCA AAGCCGGGCG
CGAGAAAAAG GCATCACCCT CACTTACCAC ATTGATGAGG ATGTCACCCA ATACTGGCAA
GGGGATGAGA TTCGTATCGG GCAAGTACTC AATAATTTGG TTGGCAACGG GATCAAGTTT
ACTGACCAGG GCGAAGTGCG TATTCGTATC CGCCTCGCCC CCGATGGGCA AGGCATTCGC
TTTGCAGTAG AAGATTCGGG TATTGGGATT GCTGAGGAAG AGCAAGCGAC CTTGTTTGAT
GCCTTTACCC AAGCTGACGC CGGACGGCGC AAGCTTGGAG GGACAGGTTT AGGTTTAGCG
ATCAGCCGTA AGTTGGTGCA GGCGATGGGG GGCGAGTTAC AACTCGCTTC GCAGCTCGGT
CAAGGCAGCT GTTTTTGGTT TACCTTGCCG CTACCAGTGG GAGAGCCAGT TGAAACGCCC
GCCCTAGCCG TAGATGATGT GCCTGTGGCT AACGTGCTGC TGGTCGAAGA TAACGAAGTC
AACTGTTTGG TTGCGCAAGG TTTTTTAACC AGTCTGGGTC ATCAAGTGAC TCTCGCGAAA
AGTGTGCAAG AGGCGAAACT CTGCTTTCAG CAGCAACGCT TTGATATTGC TCTGCTTGAT
ATTCATCTGC CCGATGGCAA TGGGGTGGAT CTGCTGCGCG ACCTGCGACA AATGGAAGAC
AGTATTCACA ATGCGGTGAT CCCATTTATT GCCGTTTCTG CCCACGTGTT TAATGAAGAA
GTCGCCGGAT ATTTAGCAGC AGGATTTGAT GGCTATCTGC CTAAACCGCT GGTCAAAGAA
CAATTAGCCG CCATGTTGCG TCAACAGTTA ACGGCGAAGA GCGGAGATGA TGCCGATATG
CGCGATAAAG CAGAGAGCCA TGATACAAGC AGCATCTTCG ATAATGGCCA ACCGCAGGGC
GAGCCTTCGC CTGAAGCGCA AGCTGTGCGC AAAGAATGGG TCGCGGTAAT GGATCACGCC
AAATTTGAGC AGGATGTGCA GATCCTTGGT GTGGAGAAAA TGCGTGAGAT TGTTGGCTAT
TTTGAACAAG GGTGTGCTGA GTTTTTCGCT CTGTGTGAGG CAGAGCGTGA TAACGATGCA
CAGATCAAAA GCCAAGCTCA TAAATTGAAA GGTTCTGCTG GCGCATTGTG GCTAACGCAA
CTCTACCAAC TGTGCCAGCA AATCGAGAAA GCCGATTCGC CTGCCGCTGC ATATCAACAA
ACGCCTCTGG TTGATGCGGT AGAAAATGCC AAGCAGGCTT TGCGTAATGC ATTGGATTTG
CTGAGTAAAG AATAA
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| Protein sequence | MRLAKASIGR KLLFSFSAMA LLVLLSALIG VLGFSLVAKT ERDVVNNAIP SMIEARQVAE
LSHQIIASVQ TLSNAKNEQE HQAAGQKVFS QLETLLTHIQ QLGEEAFDSV LLDRLEQDVQ
NVIDTLAQLG RRVEHRLTLE SQLSTSVKEM RKLAQELEQL TRTQVLNTST IAIANVTHIY
DLLQKQQQAQ VYQALDNLVE VDLDLAERLH ELHLLAFKVL NEIEETQTVT DLERILALDS
EFAANLSIMQ RRVQAVEDPT RSKQMVSLLR GLEKRRIVFE LLKQRYSNEQ VAQQLQHDTL
TQFAKLNNTV NQLVDASNQV TTAAVSKLSN TLYYAQLILT VLGLLGLVIV VWIVWKVVYR
SVIQRLDQHT AALISVAKGQ LDVDVSTQGN DELGQMGQAI AHARDTAKAL KVVAESEVLA
KRELQQHKEH LEELVEQRTC QLSEMNHKLN QEVLNHAKAR QQAEQASRAK SAFLATMSHE
IRTPMNGVLG TARLLQDTTL TSTQQHYVQV INRSGRSLLA ILNDVLDYSK IEAGHLEIHH
THFDLYRLVS ETHELMQSRA REKGITLTYH IDEDVTQYWQ GDEIRIGQVL NNLVGNGIKF
TDQGEVRIRI RLAPDGQGIR FAVEDSGIGI AEEEQATLFD AFTQADAGRR KLGGTGLGLA
ISRKLVQAMG GELQLASQLG QGSCFWFTLP LPVGEPVETP ALAVDDVPVA NVLLVEDNEV
NCLVAQGFLT SLGHQVTLAK SVQEAKLCFQ QQRFDIALLD IHLPDGNGVD LLRDLRQMED
SIHNAVIPFI AVSAHVFNEE VAGYLAAGFD GYLPKPLVKE QLAAMLRQQL TAKSGDDADM
RDKAESHDTS SIFDNGQPQG EPSPEAQAVR KEWVAVMDHA KFEQDVQILG VEKMREIVGY
FEQGCAEFFA LCEAERDNDA QIKSQAHKLK GSAGALWLTQ LYQLCQQIEK ADSPAAAYQQ
TPLVDAVENA KQALRNALDL LSKE
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