| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0632 |
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| Symbol | secF-2 |
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| ID | 5134813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 691241 |
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| End bp | 692143 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530954 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001215471 |
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| Protein GI | 147671786 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGACT ATTTAAAATC TCGAATCCGT CCGATTCGCT ACATCACTGG CATTATTTCG
GTCTTGTTGA TGGTGATCTC GCTAGGGGCT TTTGCAATCA AAGGCTTGAA TATGGGCTTA
GATTTCACCG GCGGGATGGT CACGGAAGCG ATCATTAATC ACTCGGTGAC CAAGTCTCAG
CTGATGGATC AATTACAGCC GGTACTGGGG GAGTCGGTTT CTGTCACGCC TTCGGGAGAA
GAAGGGCGTT GGGTGATCCG TTATCCATTA GCTGCTGAAG ATGCTACGCC TGTAGACATT
GCGACAGAGC TGCATCACAT CTCAGATCAA GTGCAAATTG TCAGTAACAG CATGGTGGGA
TCGCAAGTTG GGCAAGAGTT GATCGATCAA GGCGGACTCG CTTTGTTGAT TTGTCTGCTC
TCAATACTGG CTTACTTGAG CTTTCGTTTT GAATGGCGTT TAGCGAGCGG AGCCCTATTA
GCTCTGCTGC ATGACGTGAT TTTGGTACTG GGTTTCTTTG CGATAACGCA AATGGAATTC
AACTTGACGG TATTTGCCGC AGTCTTAGCG GTGCTCGGCT ATTCATTGAA CGACTCGATC
ATTATTTCGG ATCGTATCCG AGAATTACTG TTAGCGAAGC AGCAGACGCC AACCGCAGAT
ATTAATGACC AAGCCATTAT TGCGACCTTC TCACGTACAA TGGTGACATC AGGTACCACT
TTGATGACCA TTTCGGCACT TTGGCTGATG GGCGGTGCCC CGTTACAAGG TTTCGCCATC
GCCATGTTTA TCGGCATAAT TTCAGGGACT TGGTCATCGA TTTCGATTGG TACTGTGTTA
CCTGAATGGT TAGGTTTGGA ATCGAAGCAC TATCTCCCTG TTGAGTTGGA TGCAGCACCA
TAA
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| Protein sequence | MVDYLKSRIR PIRYITGIIS VLLMVISLGA FAIKGLNMGL DFTGGMVTEA IINHSVTKSQ
LMDQLQPVLG ESVSVTPSGE EGRWVIRYPL AAEDATPVDI ATELHHISDQ VQIVSNSMVG
SQVGQELIDQ GGLALLICLL SILAYLSFRF EWRLASGALL ALLHDVILVL GFFAITQMEF
NLTVFAAVLA VLGYSLNDSI IISDRIRELL LAKQQTPTAD INDQAIIATF SRTMVTSGTT
LMTISALWLM GGAPLQGFAI AMFIGIISGT WSSISIGTVL PEWLGLESKH YLPVELDAAP
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