| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0628 |
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| Symbol | phaC |
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| ID | 5134754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 686402 |
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| End bp | 688177 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530950 |
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| Product | polyhydroxyalkanoic acid synthase |
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| Protein accession | YP_001215467 |
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| Protein GI | 147671535 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCAAC ATGCCTTTAC GGACTACCTT GTCCAATTAC AACAAGTGAA TCAACGTTGG
TGGAAAGAGG TTGAACAGAG CAAAGCGACC GTAAATTCCC CACTCAACAA AGCGATGCAA
GAAGTGAATC TGGAAGACTC ACTTAAGTTT TTTGAGCAAG CGGTCAACCA ACCGGCTGCC
TTGTTAAAAT TGCAAACTCA ATGGTGGGAG CAACAACTTC AGATTTGGCA AAAAGTGGTG
CTAGAGTCCA AAGTTCAATC TATCATGGAA GCCGAAAAAG GAGACAAGCG TTTTAGCCAT
GAAGCGTGGC AGCAAGATCC TTTCTTCAAT TTCATCAAAC AATCCTATCT GTTGTTTAGC
AAAACGTACC TCGATACCAT CAACGCTATC GAAGGCCTCG ATGAGAAATC CAAAGAGCGG
ATTTTGTTCT TCTCACGTCA GATGATCAAT GCGCTTTCTC CGAGCAATTT CATTGCGACG
AACCCAGAGT TGCTGCGTCT AACCTTAGAG AAAAATGGTG AAAACTTGAT TGCGGGTCTT
GAGCAACTGA AAGAGGACGT GGCTTCCAGT GCGGACATTC TCAAAATCCG CATGACCAAC
AACAATGCTT TCCGTCTTGG CGAAGATGTG GCCAACACGC CGGGTGAAGT GGTGTTCAAA
AATGAGGTGT TTGAGCTCAT TCAATACAAA CCTCTGACTG AGCAAGTGGC AGTAACGCCA
CTGTTGATCG TTCCGCCTTT TATCAACAAA TACTACATCC TTGATTTGCG TGAGAAAAAC
TCCATGGTGC GCTGGCTAGT CGAGCAAGGG CACTCTGTGT TTATGATCTC ATGGCGCAAT
CCGGGTGCGG CGCAAGCCCA ACTCAATTTT GAAGATTATG TGCTAGAAGG CGTCGTTAAA
GCGGTGAATG CGATTGAATC GATCACTGGA CAAGATCAGA TCAACGCGGC AGGTTATTGC
ATTGGCGGAA CAGTATTAGC GACAACCATT GCTTACTACG CGGCTAAACG CATGAAAAAA
CGCATCAAAA CCGCGAGCTT TTTCACCACG TTGCTCGATT TCTCTCAACC GGGAGAAGTG
GGAGCCTACA TCAACGACAC CATCATTCGA GCCATTGAGC TGCAAAATAA TGCCAAAGGC
TATATGGATG GCCGCTCACT CAGCGTGACA TTCAGTTTGC TCCGTGAAAA TAGCCTGTAC
TGGAATTACT ACGTGGACAA CTACCTGAAA GGGCAGAGTC CGGTTGATTT TGACCTTCTG
TACTGGAATA GCGACAGCAC TAACGTGGCA GGTGCTTGCC ATAACTTCTT GTTACGAGAG
CTCTATCTTG AGAACAAGTT GGTTCAGGAG AAGGGCGTCA AAGTCGGTGG TGTCTGGATT
GATTTAGATA AAATCAAAGT GCCGAGTTAT TTCATTTCTA CCAAAGAAGA TCACATTGCT
CTATGGCAAG GCACTTACCG TGGCGCATTG CGTACGGGGG GTAACAAAAC CTTTGTGCTG
GGTGAGTCTG GGCATATTGC GGGAATCGTT AACCATCCTG ACAAACGTAA GTATGGTTAC
TGGGTTAACG ACACCTTGGA TGATTCTGCG GAAGATTGGC TGGAAACGGC CCAGCACCGA
GAAGGTTCAT GGTGGGTGCA TTGGAATGAA TGGTTAAACG GCTTTGCAGA TGGCAGCAAA
GTTGAACCTT ATCCATTAGG TAATACCGAC TATCCGGTGT TGTACAGCGC ACCGGGTGAG
TATGTAAAAC AGGTCTTACC CATTCAAGAC GCCTAA
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| Protein sequence | MFQHAFTDYL VQLQQVNQRW WKEVEQSKAT VNSPLNKAMQ EVNLEDSLKF FEQAVNQPAA
LLKLQTQWWE QQLQIWQKVV LESKVQSIME AEKGDKRFSH EAWQQDPFFN FIKQSYLLFS
KTYLDTINAI EGLDEKSKER ILFFSRQMIN ALSPSNFIAT NPELLRLTLE KNGENLIAGL
EQLKEDVASS ADILKIRMTN NNAFRLGEDV ANTPGEVVFK NEVFELIQYK PLTEQVAVTP
LLIVPPFINK YYILDLREKN SMVRWLVEQG HSVFMISWRN PGAAQAQLNF EDYVLEGVVK
AVNAIESITG QDQINAAGYC IGGTVLATTI AYYAAKRMKK RIKTASFFTT LLDFSQPGEV
GAYINDTIIR AIELQNNAKG YMDGRSLSVT FSLLRENSLY WNYYVDNYLK GQSPVDFDLL
YWNSDSTNVA GACHNFLLRE LYLENKLVQE KGVKVGGVWI DLDKIKVPSY FISTKEDHIA
LWQGTYRGAL RTGGNKTFVL GESGHIAGIV NHPDKRKYGY WVNDTLDDSA EDWLETAQHR
EGSWWVHWNE WLNGFADGSK VEPYPLGNTD YPVLYSAPGE YVKQVLPIQD A
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