| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0624 |
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| Symbol | uhpC |
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| ID | 5134992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 680586 |
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| End bp | 681896 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530946 |
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| Product | regulatory protein UhpC |
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| Protein accession | YP_001215463 |
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| Protein GI | 147672341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG TACCTATGGT GCAACCCATT CAGGCAATGG AAATCGATCA GGCTTATCGC
CACTGGCGCA TTCATTTAAT GATTTCCATG TATGTCGGTT ATGGCGTGTT CTATCTCACT
CGTAAAAGCT TCAACTTTGC GATGCCGCAA ATGCTCAGTG AGTTAGGACT CGATTATTCC
GATTTGGGTT TTCTCGGTAC GCTGTTCTAC CTCACTTACG GGGTGTCTAA ATTTGTTTCT
GGTTTGATGA TCGACCGCTC CCGCTCGCGC TATTTCATGG GGTTGGGATT AATGGCTACC
GGCATCATCA ACATCGCTTT TGGTTTTAGC TCGTCCTTGC TGGCTTTTAC CTTGTTATGG
ACAGCGAACG CTTTTTTTCA AGGCTGGGGC TGGCCTGCGT GTGCCAAGGT GCTCACCCAC
TGGTATTCAC GTAGCGAACG GGGCTTTTGG TGGTCAATTT GGAATACTTG CCACAACTTA
AGTGGCGCAT TGATCCCCAT CGTGATTGGT TTTATCAGCT TATCCTTTGG CTGGCGTTAC
GGATTCTTGT TTGCCGGCGG AGTTGCGATC TTCGTTGGGC TTTGGCTCTG TTATCGCATC
CAAGAGAAGC CAAGCGAAAT GGGGTTGCCT TCGGTCGGTG AATGGCGCGG TGATGCTCTC
GAACTCGAGC ACGAAAAAGA AGGCCAAGGT CTCGCCTTCC GCGTCGCGGT TTATCGCTAT
GTACTGACTA ATCGCTACAT TTGGCTGTTG TGTGGATCTT ACTTGCTGGT GTACGTGGTC
AGAATTGGCA TTAACGACTG GGGATCGCTT TATCTGGTTG AGCGGCACGC GTACAACATT
CTCAGTGCCA ATAGCGCAGT AGCCATGTTT GAAGTGGGCG GATTTTTGGG CTCATTGCTT
GGTGGCTGGG GTTCCGACTA TTACTTTCGC GGCAACCGCG CCCCGATGAA TTTGATTTTT
GCGTTAGGCA TTTTTGCCTC CGCTGCGGCC TTATGGCTAA CCCCTATCGA TCATTTATGG
TTTTTGGCTG GCTGCTTCTT CTGTATCGGA TTTTTTGTCT TCGGCCCGCA AATGATGATT
GGTATGGCCG CCGCAGAATG CGCAAGGAAA GATTTGGCGG GCACCGCGAC CGGATTTGTT
GGGCTATTTA GCTATCTCGG TGCAGCGTTA GCCAGCTACC CCATGTCACT GGCTATTGAA
GCATGGGGCT GGGAAGGTTT CTTCTGCCTA ATTACTGCGG CAGCAGCCGT GATCAGTTTA
CAACTGCTGC CCTTTATAAA AGCTCAGCAA CCGGTGACGG AAGATGAGTG A
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| Protein sequence | MKIVPMVQPI QAMEIDQAYR HWRIHLMISM YVGYGVFYLT RKSFNFAMPQ MLSELGLDYS
DLGFLGTLFY LTYGVSKFVS GLMIDRSRSR YFMGLGLMAT GIINIAFGFS SSLLAFTLLW
TANAFFQGWG WPACAKVLTH WYSRSERGFW WSIWNTCHNL SGALIPIVIG FISLSFGWRY
GFLFAGGVAI FVGLWLCYRI QEKPSEMGLP SVGEWRGDAL ELEHEKEGQG LAFRVAVYRY
VLTNRYIWLL CGSYLLVYVV RIGINDWGSL YLVERHAYNI LSANSAVAMF EVGGFLGSLL
GGWGSDYYFR GNRAPMNLIF ALGIFASAAA LWLTPIDHLW FLAGCFFCIG FFVFGPQMMI
GMAAAECARK DLAGTATGFV GLFSYLGAAL ASYPMSLAIE AWGWEGFFCL ITAAAAVISL
QLLPFIKAQQ PVTEDE
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