| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0623 |
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| Symbol | uhpB |
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| ID | 5134252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 678935 |
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| End bp | 680518 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530945 |
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| Product | sensor protein UhpB |
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| Protein accession | YP_001215462 |
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| Protein GI | 147671972 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGC TGTTTCCACT GATTTTTGCT TTTGTGCTCT ACAGTATTAG CCAATTTAGT
CTATGGAATG TCAGCCAATA TTTGAGCCAC AATCCGCTCC AAGCCTACTT ACTTTTTCCC
ACAGGCTTAC GCTTGGCGGT CTATTTGTTA GCTCGCCCAA CCTATGCTTG GGTTTGGTTA
CTGAGTGACA TGCTTTTGGC TGGCGCGATC TTGGTGTTGC TTCCAGACCA ATCCAGCCCG
TTGATGCTGC TCATGCCTTG GGTGGTTTGG CTAGCCGCAG TCATTGCCCG CCAACACTGG
CCGAAATTAC ATTTGTACTG GCAAAAGTTG CTACTGATTG TGGCACTGGT GCTGCTGCAC
ACTATTTTGG TGGGTATCAC TTTTACCTTG TTGGCGAAAC CGCTACACAT GGAGGCGGAG
ACGTTAATTA CCGTGAGTAT CGCTTCGCTC ACGGGAGGCA TTGTGCTGAC CCCATTTTTG
TATCTGGTGG CCGACTATCT CCGTCACCAA ACATGGCATC CGCTTTCTCC ACAACTGATT
CACCACGATG TGAAACTTAA ACCGAAAATG TTGATGTGGA GCTTACTGTT TTTCAGCTTA
GGACTGCTGG CGGAGCTGAC CTTACTTGAG CAGATGAAGC CGTTTGCCCT ATTGATCATC
TTGCTCCCGA CGATTTTTCT TGCCTATCGT TATGGCTGGC AAGGCGGTGT ATTGGCGAGC
AGTTTAAACT GCATTCTGCT AGCGACGGCA CGCCAGTTCA GTGGTTCATT CTCTTCGGAT
CAAGAGCTGC TGATTTTTAT GTCGAGCCAA GCTTTTGTCG GGCTTGGATT GGGTATCGCC
ATTAGCCGCC AGCATCAGCT CGCTTTATTG CTGCAAAAAA TGAACACCCG CTTAGCCAAA
GAGCTGCGTG AAAAGCAAGA TCTGGCGCGC CAGCTCGTTT CTGTAGAAGA GCAGATTCGC
AAATCCGTTG CCCGTGAACT GCACGATGAG ATTGGCCAAA ACATTACCGC GATTCAAATT
CAATCCATGC TCGCTGAACG TTTAGCCAGT AATGATCAAG CCAAACAGGC AGCTTCCAGC
GTGCAGTCGC TCGCCATGCG GATTCATCAA TCCACACGTC AGCTCTTAAA GCAACTACGC
CCGCACATTT TGGATGAACT CGGGTTAGAA CATGCCATTC GTCAGCTGGT GCAAGAAATG
CGTTTTGCCG AACAAGGTAT GACGGTTCGC CTCAATATGG GGGTCAATCC GCAAAAGCTG
GACGATACCA CGCGAGTCAC TCTGTATCGG ATTGTGCAGG AGTTGCTGAA CAACATTTGC
AAACATGCCA AAGCCACCCG CGTACACATC AGCCTATTTC CGGGAAGTGA AATGGTTTTG
GAAGTCAAAG ACGATGGCAT TGGTTTGCCT ACCGACTGGC GGGTGCGTGG GCAAGGCTTA
AAAGGATTGA GCGAGCGCGT ATCCGCACTC GGCGGTCAAT TAAAGATGAC TTCATCCACT
TTCCAAACTG GCACGCGAAT AATTGTTAAC TTACCCACAA AACGCTCAAT AACCAGCGAA
AAACTAGGAA ATATTCCTAG ATGA
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| Protein sequence | MAKLFPLIFA FVLYSISQFS LWNVSQYLSH NPLQAYLLFP TGLRLAVYLL ARPTYAWVWL
LSDMLLAGAI LVLLPDQSSP LMLLMPWVVW LAAVIARQHW PKLHLYWQKL LLIVALVLLH
TILVGITFTL LAKPLHMEAE TLITVSIASL TGGIVLTPFL YLVADYLRHQ TWHPLSPQLI
HHDVKLKPKM LMWSLLFFSL GLLAELTLLE QMKPFALLII LLPTIFLAYR YGWQGGVLAS
SLNCILLATA RQFSGSFSSD QELLIFMSSQ AFVGLGLGIA ISRQHQLALL LQKMNTRLAK
ELREKQDLAR QLVSVEEQIR KSVARELHDE IGQNITAIQI QSMLAERLAS NDQAKQAASS
VQSLAMRIHQ STRQLLKQLR PHILDELGLE HAIRQLVQEM RFAEQGMTVR LNMGVNPQKL
DDTTRVTLYR IVQELLNNIC KHAKATRVHI SLFPGSEMVL EVKDDGIGLP TDWRVRGQGL
KGLSERVSAL GGQLKMTSST FQTGTRIIVN LPTKRSITSE KLGNIPR
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