Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0605 |
Symbol | |
ID | 5134825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 658279 |
End bp | 658917 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530927 |
Product | haloacid dehalogenase/epoxide hydrolase family protein |
Protein accession | YP_001215444 |
Protein GI | 147671799 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATT TATTACAAAA AATTGGAGAT GCTGTGACTG TTGTCAACTT TAGCCTTTAT GAAGGATTCA TATTTGATAT GGATGGAACC CTGCTTGATA CCATGCCTGC GCATTTAGCC GCTTGGGAAG CGACGGCGAA GCATTTTGAC TTCCCATTTG ATGCCCAGTG GCTCTATGGA TTAGGTGGGA TGCCAAGTGC AAAAATTACG ACGCACATCA ATAAAAAATT AGGCTTGGCG CTCGATCCCG ATCGCGTCGC AGCCTACAAA ATGGATTGGT TTGCCAGCAT GGGGCTGCAA GCGGAAGTGA TCCCCGCCAC CTATGAATTA CTCTACCAAT GGCAGGGTAA GAAGAAAATG GCAATAGGGA CGGGGAGCCA ACGTGATAGC GCGCTGCGTT TATTAAGTAA TGCGCAGGTG TTGGATAAAT TTGATGCAGT TGTGACGGCC AGCGATGTGC AACAGCACAA ACCGCACCCC GAAACCTTTC TGATGGCGTG TGAGCAACTC GGCTTGACAC CTAAACAGTG TTTGGTGTTT GAAGATACCC AATTAGGACT TCAGGCAGCG CACGCGGGTG GGATGGATTG CATGCTAGTG ACCGAGCAAG GATTGGTTTT CTACCCCTTT GCTCATTGA
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Protein sequence | MTNLLQKIGD AVTVVNFSLY EGFIFDMDGT LLDTMPAHLA AWEATAKHFD FPFDAQWLYG LGGMPSAKIT THINKKLGLA LDPDRVAAYK MDWFASMGLQ AEVIPATYEL LYQWQGKKKM AIGTGSQRDS ALRLLSNAQV LDKFDAVVTA SDVQQHKPHP ETFLMACEQL GLTPKQCLVF EDTQLGLQAA HAGGMDCMLV TEQGLVFYPF AH
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