| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0598 |
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| Symbol | |
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| ID | 5134899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 649295 |
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| End bp | 650287 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530920 |
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| Product | putative sucrose operon repressor ScrR |
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| Protein accession | YP_001215437 |
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| Protein GI | 147672416 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00468324 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTT TGCATGATGT CGCCCGTTTA GCGGGTGTCT CTAAGTCCAC CGTCTCACGC
GTCATTAATG ATGAATATGG CGTTAAAGAG TCTACAAAAA TCAAAGTGTT AAAGGCGGTT
GAGCAGTGTG GCTATATGGT CAATCAAGTC GCTAAAGACC TCAAATCACA AAAAACCAAC
TTAATTGGCG TGATTGTGCC GCGCGTCTCC TCTCACGCAA CAGCGCAAGG TGTGGATGGA
CTTACCGCTA TCTTTGAGCA AGCAGGTAAA CATGTTTTAC TGGCCAATAC TCATCAAGTC
CATGCAAAGG AAATTGAATA TATTCAGATA TTTAATCAAA AGCGGGTGGA AGGTATTGTG
TTTTATGCCA CTCACCTTGA TCAGCCGCTG ATTCATGCGA TTCAACACTC GGCGGTACCT
GTGGTTTTGG TTGGCCAAGA TGGCTCTTTG TATAACATTC CCAGTATTGT GCATGACGAT
CACCGTGTCG GCTTCGAAGC AGGACAACGC TTAGTCAAAG CAGGCTGCAA AAAGATCGGT
TTCATTGGGG TACAAAGCGA TGACATTGCG GTTGATGTGC TGCGTTCACA AGGCTTGCAG
CAAGCTCTGG GGTTCCATCA ACAAACGTTG CTGTTTCATG CGCGCGGTAA TTTCTCAATA
GAATCGGGCT ACCAAATGGC AAAACAAGCC TACCTTGACT ATCCGCAGCT CGATGGCCTT
TTCTGTGCCA CCGACAGGCT AGCGGTTGGC GCCATTAAAG CCTTGCAAGA GCTTGGGGTT
CACGTTGGAC AGCAAGTCAA ACTGCTCGGT GTCGGTAATG ATGAGTTGGC TTATGTCAGC
AATCCCCCAC TCTCCACTTT TAACTATGCT TTTGATAAGG CAGGAGAAAA CGCTGCGAAA
ATGCTATTAG AACGCATCGC CGGACGTGGA CAAGAGATGA GTAAAGTGGT ACTGACCTTC
CAAAACATTC AACGTGAGAC TTGCCCAGTC TAA
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| Protein sequence | MASLHDVARL AGVSKSTVSR VINDEYGVKE STKIKVLKAV EQCGYMVNQV AKDLKSQKTN
LIGVIVPRVS SHATAQGVDG LTAIFEQAGK HVLLANTHQV HAKEIEYIQI FNQKRVEGIV
FYATHLDQPL IHAIQHSAVP VVLVGQDGSL YNIPSIVHDD HRVGFEAGQR LVKAGCKKIG
FIGVQSDDIA VDVLRSQGLQ QALGFHQQTL LFHARGNFSI ESGYQMAKQA YLDYPQLDGL
FCATDRLAVG AIKALQELGV HVGQQVKLLG VGNDELAYVS NPPLSTFNYA FDKAGENAAK
MLLERIAGRG QEMSKVVLTF QNIQRETCPV
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