Gene VC0395_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0592 
Symbol 
ID5134145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp643591 
End bp644337 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content50% 
IMG OID640530914 
Producthypothetical protein 
Protein accessionYP_001215431 
Protein GI147672031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0472951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCTCCG TCACTTGGTC TTTGAGTGAC ACCGGTTATC AGGTGTTTTT CAATCGCGAT 
GAGCAAAGGA GTCGAGCCTT AGCGCTGCCT CCCGCCATCT ATGATCGACA AGGAGTTGCA 
GTCATGATGC CGCTCGATCC GCAAGGTCAG GGCAGTTGGA TTAGCCTTAA TCAGTTCGGG 
TTATCGCTGT GTCTGCTTAA TAACTATCAA GGCCGAGTGC CAGATGGGAC GCTGATCAGC 
CGCGGATTGC TGCTCAAATC CCTTGCGGGA TCCTCTTCGA TTGAACAAAT CACGCTTGCG 
TTTGAAAAAT TGGCGTTGTC TCGTTTTGCT CCCTTCACTC TGCTGGCTTT TGATCCTTTG 
CTTACTCAAC AGCAAGGTGA GGTATTGGCT TATGCGTGGG ATGGCGAACA ATTTTGCTCA 
GGCGTGACTT CATCACCCCT TTTTTCATCC GGTGTTGCGC TTGACGAAGT GCAGCGCTAT 
CGCACGCAGG TCTATCAACA CCTCACTGCC GATGGAGTAA CACCGGAAAA GTTGTTGGCG 
TTTCACTGCC ATCAACACCC ACAGTGGCCG CATCTTTCGG TGGCGATGCA GCGAGACGAT 
GCCCATACCG TGAGTTTTAC TCACATCAAG GTCAGTGATG GACAACTGGG AATGAGTTAT 
TTCTCTGGTC GCCCAACGCA GCTGACAGAT CAGATATTGC ATCAGCCGCA GTATCCATTT 
CCTCAAATAA TATCTTTGGT TTCTTAA
 
Protein sequence
MCSVTWSLSD TGYQVFFNRD EQRSRALALP PAIYDRQGVA VMMPLDPQGQ GSWISLNQFG 
LSLCLLNNYQ GRVPDGTLIS RGLLLKSLAG SSSIEQITLA FEKLALSRFA PFTLLAFDPL 
LTQQQGEVLA YAWDGEQFCS GVTSSPLFSS GVALDEVQRY RTQVYQHLTA DGVTPEKLLA 
FHCHQHPQWP HLSVAMQRDD AHTVSFTHIK VSDGQLGMSY FSGRPTQLTD QILHQPQYPF 
PQIISLVS