| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0588 |
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| Symbol | |
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| ID | 5134248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 639099 |
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| End bp | 640802 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530910 |
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| Product | putative NADH oxidase |
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| Protein accession | YP_001215427 |
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| Protein GI | 147672140 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAA TAGTGATTAT TGGTGGTGTT GCAGGTGGAG CCTCGGCGGC GGCTCGTGCG
CGTCGACTCA GCGAAGACGC TGAAATCATC ATGTTCGAGC GTGGCCCCTA CGTTTCCTTT
GCCAACTGCG GCTTGCCATA TCACATCGGT GGTGACATCA AAGAGCGCAG CAATTTGCTG
CTGCAAACAC CGGAAAGCTT TTTAGCGCGT TTTAACGTGG ATGTGCGCAC CATGAATGAA
GTGTTGCGCA TTAATCGCGC CGCAAAGACC ATTACTGTGC GTAATCTGCT CGATCAATCT
GAGTATGATG AAAACTATGA TTTTCTGCTG CTCTCTCCCG GTGCAGGTCC AGTCATCCCG
CCGATTCCGG GGATTCAAAA CCCACTGACG CATTCGCTGC GCAATATTCC AGACATGGAT
AAGATCATCC AGACGCTGCA AATGAATAAG CCTGAGCATG CTACCGTGGT TGGCGGGGGT
TTTATCGGTT TGGAAATGAT GGAAGCCTTC CATCACCTTG GGATAAAAAC CACGCTGATT
GAAATGGCCG ATCAAGTGAT GACACCGGTC GATCGCGAAA TGGCGGGCTT TGCTCACGCT
GAAATCCGCG CCAAAGGCAT CGATTTACGA TTAGGTGCGG CTTTGAAATC AGTCGAATAC
AGACCCGCCG CCACCTTACC TAGCACGGAA TCGGGGGAAT CCCTTGAGCA TAAACACGTG
GAAGGCGAAT TGGATTTGGT GCTCAGCAAT GGTGACACGC TAACTACCGA CATTCTGATC
ATGGCGATTG GTGTACGCCC AGAAACCAAA CTGGCTGCGG AAGCCGGTTT GCAGCTCGGA
GAACTCGGTG GTATTTGGGT TAACGAGCAG ATGCAAACCA GCGATCCGGC GATTTACGCG
GTTGGTGATG CGGTTGAAGA GAAAGACTTT GTCACAGGCA AGCAAACGCT CGTGCCACTG
GCAGGTCCTG CCAACCGCCA AGGTCGTATG GCCGCAGATA ACATGCTTGG CCGCAACGAA
AGCTACCAAG GCACACAAGG TACTGCGATT TGTAAGATTT TTGATTTAGC GGTCGCTTCG
ACCGGTAAAA ATGAAAAGCA ACTTAAGCGT GAAGGCATTG CTTACGAAAA AGTGTATGTG
CACACCGCAA GCCATGCGAG CTACTACCCG GGTGCGGAAG TGGTGTCGTT CAAGATGTTG
TTTGATCCCC AGACAGGCAA AATCTTCGGC GCACAAGCCG TAGGTAAAGA TGGCATCGAT
AAACGCATCG ACGTGATGGC GGTTGCGCAG CGTGCAGGCA TGACGGTTGA GCAGTTACAG
CACCTTGAAC TGACCTACGC TCCACCGTTT GGTAGCGCGA AAGATGTGAT TAACCAAGCC
GCCTTTGTCG CCACCAACCT GATAAAAGGT GATGCGAAAG CGATCCATTT TGATGAGATT
GATAATCTCA CCGATGAGCA AGTGCTGCTC GATGTGCGTA ACCCGATGGA GTTACAAAAC
ATGGGTTATT TTCCCGGCGC AATCAATATT CCTGTTGACC AGTTGCGCCA GCGCATGAAC
GAGCTGCCAA AAGACAAAGA GATTGTGATT TATTGCCAAG TTGGGTTACG CGGTAACGTA
GCGTACCGTC AACTGGTCAA TAACGGCTTT AAAGCACGCA ACCTGATTGG GGGTTACCGT
ACTTACAAGT TTGCTAAGGC TTAA
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| Protein sequence | MTKIVIIGGV AGGASAAARA RRLSEDAEII MFERGPYVSF ANCGLPYHIG GDIKERSNLL
LQTPESFLAR FNVDVRTMNE VLRINRAAKT ITVRNLLDQS EYDENYDFLL LSPGAGPVIP
PIPGIQNPLT HSLRNIPDMD KIIQTLQMNK PEHATVVGGG FIGLEMMEAF HHLGIKTTLI
EMADQVMTPV DREMAGFAHA EIRAKGIDLR LGAALKSVEY RPAATLPSTE SGESLEHKHV
EGELDLVLSN GDTLTTDILI MAIGVRPETK LAAEAGLQLG ELGGIWVNEQ MQTSDPAIYA
VGDAVEEKDF VTGKQTLVPL AGPANRQGRM AADNMLGRNE SYQGTQGTAI CKIFDLAVAS
TGKNEKQLKR EGIAYEKVYV HTASHASYYP GAEVVSFKML FDPQTGKIFG AQAVGKDGID
KRIDVMAVAQ RAGMTVEQLQ HLELTYAPPF GSAKDVINQA AFVATNLIKG DAKAIHFDEI
DNLTDEQVLL DVRNPMELQN MGYFPGAINI PVDQLRQRMN ELPKDKEIVI YCQVGLRGNV
AYRQLVNNGF KARNLIGGYR TYKFAKA
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