Gene VC0395_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0576 
SymbolglpM 
ID5134702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp629819 
End bp630169 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID640530898 
ProductglpM protein 
Protein accessionYP_001215415 
Protein GI147671889 
COG category[R] General function prediction only 
COG ID[COG3136] Uncharacterized membrane protein required for alginate biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTT TGTTTTTCAA GTGCTTGCTT GGAGCGCTTG CGGTGTTGAT CATTGCCCTG 
TTATCGAAAA CCAAAAGCTT TTTTATCTCC GGCCTTGTGC CGCTATTTCC CACCTTTGCT
TTAATCGCCC ATTATATTGT TGGCACCGAA CGCACTATGG AAGATCTGCG CACTACCGCG
CTGTTTGGGC TGTATTCGCT TATCCCGTAT GCGGCGTATC TTCTTGCGGT GTATTACTTT
AGTTACCGCT TGAGCCTTAC TGGCACTCTG GTCTGTGCCA CCTTGGTTTG GCTGGTATTT
GCTGCACTTT TACTGGTGGG TTGGACTCGT TTACACCCGA GCATGGCCTA A
 
Protein sequence
MAALFFKCLL GALAVLIIAL LSKTKSFFIS GLVPLFPTFA LIAHYIVGTE RTMEDLRTTA 
LFGLYSLIPY AAYLLAVYYF SYRLSLTGTL VCATLVWLVF AALLLVGWTR LHPSMA