Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0576 |
Symbol | glpM |
ID | 5134702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 629819 |
End bp | 630169 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530898 |
Product | glpM protein |
Protein accession | YP_001215415 |
Protein GI | 147671889 |
COG category | [R] General function prediction only |
COG ID | [COG3136] Uncharacterized membrane protein required for alginate biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGCTT TGTTTTTCAA GTGCTTGCTT GGAGCGCTTG CGGTGTTGAT CATTGCCCTG TTATCGAAAA CCAAAAGCTT TTTTATCTCC GGCCTTGTGC CGCTATTTCC CACCTTTGCT TTAATCGCCC ATTATATTGT TGGCACCGAA CGCACTATGG AAGATCTGCG CACTACCGCG CTGTTTGGGC TGTATTCGCT TATCCCGTAT GCGGCGTATC TTCTTGCGGT GTATTACTTT AGTTACCGCT TGAGCCTTAC TGGCACTCTG GTCTGTGCCA CCTTGGTTTG GCTGGTATTT GCTGCACTTT TACTGGTGGG TTGGACTCGT TTACACCCGA GCATGGCCTA A
|
Protein sequence | MAALFFKCLL GALAVLIIAL LSKTKSFFIS GLVPLFPTFA LIAHYIVGTE RTMEDLRTTA LFGLYSLIPY AAYLLAVYYF SYRLSLTGTL VCATLVWLVF AALLLVGWTR LHPSMA
|
| |