Gene VC0395_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0574 
Symbol 
ID5134453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp628782 
End bp629297 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID640530896 
Producthypothetical protein 
Protein accessionYP_001215413 
Protein GI147672381 
COG category[R] General function prediction only 
COG ID[COG3981] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTAA CTCGATTAAC TTTGCAGGAT GAAGCGGCGT TTGCCGAGTT CTTCCAAGAT 
TTTCAGCGCC ACGACCCGAT CAATTGTGAT TTTTACCGCC AAGGCGATGA GAATTTTGCC
GACTATGTGC AACTGTTGGA TGACCACGCC CACGGCCAAA ACCTGCCTTG TGGCTACGTG
CCTTGCAGCT ATTTTTGGTA TCAGGACCAA CAAGGCAAAA TTCTGGGTGC GCTGCGTTTG
CGCCACCACA TTGATACGCC ATTTCTTACT AACGAAGCGG GGCATATTGG TTACGATGTT
GCACCCAGTG CGCGCCGCAA GGGCATTGGC CGCGAAATGC TGCGCCTTGG ATTGATAGAA
GCCAAATGCT TAGGCTTAAA ACGCGTGTTG CTGGTTGCCG ATAGCGATAA TCACGCATCA
CGCCGCGTGA TTGAAGTTAA CGGCGGTGTG TTTGAAAGTA CGATCACCGG AGAGTATTTC
CCCTCTTTAC TGGCACGCTA CTGGATTGAT CTTTAA
 
Protein sequence
MPLTRLTLQD EAAFAEFFQD FQRHDPINCD FYRQGDENFA DYVQLLDDHA HGQNLPCGYV 
PCSYFWYQDQ QGKILGALRL RHHIDTPFLT NEAGHIGYDV APSARRKGIG REMLRLGLIE
AKCLGLKRVL LVADSDNHAS RRVIEVNGGV FESTITGEYF PSLLARYWID L