Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0564 |
Symbol | talB |
ID | 5133942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 617854 |
End bp | 618804 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530886 |
Product | transaldolase B |
Protein accession | YP_001215403 |
Protein GI | 147672144 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATA AATTAGCGCA ACTTCGTAAA CTGACCACAG TCGTGGCCGA CACTGGTGAA ATTGATGCAA TCAAAAAATA CCAGCCAGAA GACGCAACCA CTAACCCTTC TCTGATTCTA AAAGCTGCGC AGATTGCTGA ATACGCACCT CTGATTGATC AAGCTATCGC CTACGCAAAA ACTCAAAGCA ACGACAAAGC ACAACAAGTA CAAGACACTT GTGACATGCT GGCGGTCAAC ATCGGTAAAG AAATCCTAAA AACCATTCCG GGCCGTATCT CTACTGAAGT TGACGCACGT CTTTCTTACG ATATGGAACG CAGCGTAGCG AAAGCACGTC AGCTAGTAAA AATGTACAAC GATGCGGGCA TCAGCAACGA TCGTATCCTG ATCAAACTGG CTTCAACTTG GGAAGGCATC CGCGCGGCGG AAATTCTTGA GAAAGAAGGC ATCAACTGTA ACCTGACTCT GCTGTTCTCT TTCGCACAAG CGCGTGCGTG TGCTGAAGCA GGGGTGTTCC TGATCTCTCC TTTCGTTGGC CGCATCATGG ACTGGTACAA AGCTAAAGAA GGTCGTGATT TCGCGGCAAG CGAAGATCCA GGCGTACTGT CAGTCACCAA GATCTACAAC TACTACAAAG AGCACGGCTA CAAAACCGTA GTAATGGGCG CTAGCTTCCG TAACATCGGT GAGATCCTAG AACTGGCTGG CTGTGACCGC CTGACTATCG CACCTTCGCT ACTGGCTGAG CTTGAAGCGG CTGAAGGCGA ATTAGTTGCG AAACTGGTTG ACTCAAAAGG CTCTAAAGCT CGCCCTGCTC CAATGACGCA CAGCGAATTC CTGTGGGAAC ACAACCTAGA CGCTATGGCC GTTGAAAAAC TGGCTGAAGG CATCCGTAAC TTCGCGGTTG ACCAAGGCAA ACTGGAAGCG ATGATCGCGG CTAAGCTGTA A
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Protein sequence | MSNKLAQLRK LTTVVADTGE IDAIKKYQPE DATTNPSLIL KAAQIAEYAP LIDQAIAYAK TQSNDKAQQV QDTCDMLAVN IGKEILKTIP GRISTEVDAR LSYDMERSVA KARQLVKMYN DAGISNDRIL IKLASTWEGI RAAEILEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG RIMDWYKAKE GRDFAASEDP GVLSVTKIYN YYKEHGYKTV VMGASFRNIG EILELAGCDR LTIAPSLLAE LEAAEGELVA KLVDSKGSKA RPAPMTHSEF LWEHNLDAMA VEKLAEGIRN FAVDQGKLEA MIAAKL
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