| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0557 |
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| Symbol | |
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| ID | 5134799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 610578 |
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| End bp | 611762 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530879 |
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| Product | peptide methionine sulfoxide reductase |
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| Protein accession | YP_001215396 |
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| Protein GI | 147671683 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.921771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGTTCT TTTTCTATAA CTTTGTAAAG AACCAAAAGG AAATGCTCAT GAAACGACTC
TTTACTTGGG GAGCGCCACT TTTCGCCTTG CTGGCACTCA CCCTTTCTCT GTTTAGCCAA
GCGGACACCA AACCAAGTAC CATCGACTCA ACTTCAGCCA ATTACCAGCA AGCGACATTG
GCTGGTGGCT GCTTCTGGTG TACGGAATCG GATATGGAGA AACTTCCCGG TGTCGTGGAT
GTGATTTCAG GTTATGCCGG TGGAGATGTC GATAACCCGA CTTATAAGCA AGTCTCATCG
GGTAAAACGG GACACATCGA GGTCATTCAA GTGACATTTG ACCCGAAGAT CGTCACTTAT
GAACAAGTGC TGGATCAGTT TTTCCGACAC ATCGACCCAA CCGATGATCA AGGCTCGTTT
GTGGATAGAG GTGAGCAATA TCGCCCGGCG ATTTTCTATC ACAACGCCGA GCAACTTGAA
GTGGCTAAAC GTTTTATGAT GGAGATTGAC CAACTCGGCA TATTCAAAAA GCCACTCAAA
ACCGAGTTGA TTGAGTTTAA AAAGTTCTGG CCAGCAGAAG ATTACCATCA GGACTACTAC
AAGAAGAATA AAGTTCGCTA CAACTACTAT CGCTACGCAT CAGGACGCGA TCAGTATTTA
GATGAGATTT TCGGCGCTGA CCGTAACACG AATCCGAAAA CCCTTCGCCA GTGGATTGAT
GAGAAAAATG GGCAAGCGAA CGTCAAAGCT TATGTCCGCC CATCGGATGA TCAGATCCGC
GCCAAACTGA CCAGCTTGCA ATACAAGGTG ACTCAACGCG ACGGTACAGA GCGTCCGTTT
GATAACGAGT ATTGGGATAA CAAAGAAGAA GGGATTTATG TCGATATCGT CTCGGGTGAA
CCGCTGTTCT CTTCCACCGA CAAGTACGAT TCCAAAACCG GTTGGCCGAG TTTTACCAAG
CCGATAGATA CAAGTTACAT TGTCACCAAA GATGACAATA GCCTGTTCTA CACGCGTACC
GAAGTGCGTA GCCGCTTTGC CGATTCACAC CTCGGCCATG TGTTTAACGA TGGCCCTGCT
CCAACCGGTT TGCGCTATTG CATGAACTCC GCCGCGATGC GTTTCATCCC CAAACAAGAG
ATGGCAACGC AAGGCTATGG CGAATATTTA GCTCTATTCA AATAA
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| Protein sequence | MPFFFYNFVK NQKEMLMKRL FTWGAPLFAL LALTLSLFSQ ADTKPSTIDS TSANYQQATL
AGGCFWCTES DMEKLPGVVD VISGYAGGDV DNPTYKQVSS GKTGHIEVIQ VTFDPKIVTY
EQVLDQFFRH IDPTDDQGSF VDRGEQYRPA IFYHNAEQLE VAKRFMMEID QLGIFKKPLK
TELIEFKKFW PAEDYHQDYY KKNKVRYNYY RYASGRDQYL DEIFGADRNT NPKTLRQWID
EKNGQANVKA YVRPSDDQIR AKLTSLQYKV TQRDGTERPF DNEYWDNKEE GIYVDIVSGE
PLFSSTDKYD SKTGWPSFTK PIDTSYIVTK DDNSLFYTRT EVRSRFADSH LGHVFNDGPA
PTGLRYCMNS AAMRFIPKQE MATQGYGEYL ALFK
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