| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0544 |
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| Symbol | |
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| ID | 5134527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 599550 |
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| End bp | 600761 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530866 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001215383 |
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| Protein GI | 147672112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0891201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAATTT TGGACTATAC CAAATTAAAG GTGACTTTTA TGACCATGCA TCATCCTAAT
TTACAGCAGC ACGATCGACC ACAAGCGATC AGCAGAAGCT ACCTCGATAT TCGTCATGTG
GTAAAACAGT TTGGCTCATT TACCGCGTTG AAAGAGATCA GTTTATCGAT TGAAAAAGGC
GAGTTTGTCT GCTTTCTTGG CCCTTCTGGC TGTGGCAAAA CCACCTTGTT GCGCGCCATC
GCAGGGTTAG ATCTTCCCAC CTCTGGCACC ATCCACCAAA ACCAGCAAGC GATTACTTTT
TTACCACCCG AGCAGCGTGA TTTCGGCATC GTGTTCCAAT CTTATGCTCT ATTTCCCAAT
TTAACGGTGG AAGAAAACAT CGCCATCGGT TTGCGTAATC AAGGCATGTC AGTCCGTGAT
GCGTTAGAGA AAGTGGAGCA GTGGTTGGAG ATGATCGGGC TCGCCACATC GGCACAAAAA
TACCCAAGCC AGCTCTCTGG CGGTCAGCAG CAGCGGGTCG CGTTAGCGCG TGCTTTGGCA
TTATCGCCGG GGTTATTACT GCTTGATGAA CCGCTTTCCG CTCTCGATGC CAAGGTAAGA
ACGCATTTGC GCGAAGAAAT TTGCCAACTG CAACGTAAAT TGGGCATTAC CACCATCATG
GTCACGCATG ATCAAGAAGA AGCGTTAACC ATGGCGGATC GCATTGTGGT GATGAACCAC
GGGGTGATTG AGCAAGTTGG TACGCCGCAA GAGATCTACC AAAAGCCCGC CAGCCGTTTT
GTGGCTGAGT TTGTTGGCAC GATGAATTTT ATTCCCGTTT CCATGGCGAG TTCCCAGCAA
CTGCGTATTG CTGAATCCCT TATTGCTTTG CCCAAAATCG AAAATTATAC GCCTTGCCAA
GGTGAACAAT TTGATTTGGC TGTGCGCCCT GAAAATCTAG AGCTGGTTAC GCGCTACAAC
GAGGCCATTC CAGTCGTCAT TCGCCATTTG GAGTTTCTTG GCGCGTTTTA TCGAGTCGAA
TGTGTGTTTC AAGGTGAGCG TTTGGCTCCG CCCGTGTATG TCGATTTACC GATCACACAG
GTACAAACCA TGAATTTAAA AGCGGGAGAT GTTCGATATT TGGCATTGAG AGCAGGGCAG
TTGCGTGCGT ACCGTCGTAA GGTCATGTCG ACAACGCCAG CAGCTACAGC CAGCTGTGCT
TATGCGGCTT AA
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| Protein sequence | MLILDYTKLK VTFMTMHHPN LQQHDRPQAI SRSYLDIRHV VKQFGSFTAL KEISLSIEKG
EFVCFLGPSG CGKTTLLRAI AGLDLPTSGT IHQNQQAITF LPPEQRDFGI VFQSYALFPN
LTVEENIAIG LRNQGMSVRD ALEKVEQWLE MIGLATSAQK YPSQLSGGQQ QRVALARALA
LSPGLLLLDE PLSALDAKVR THLREEICQL QRKLGITTIM VTHDQEEALT MADRIVVMNH
GVIEQVGTPQ EIYQKPASRF VAEFVGTMNF IPVSMASSQQ LRIAESLIAL PKIENYTPCQ
GEQFDLAVRP ENLELVTRYN EAIPVVIRHL EFLGAFYRVE CVFQGERLAP PVYVDLPITQ
VQTMNLKAGD VRYLALRAGQ LRAYRRKVMS TTPAATASCA YAA
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