Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0532 |
Symbol | |
ID | 5135008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 585510 |
End bp | 587102 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530854 |
Product | putative peptide ABC transporter, ATP-binding protein |
Protein accession | YP_001215371 |
Protein GI | 147671428 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGATT GGGTATTGAA GATAGATAAC CTGTCGGTGG GCTTTGGTAT CGCAGGGCAG GCACGCCCTG TGACGGAAGG GGTAAGCTTA ACCATTGCGC GTGGTGAAAC GTTGGCTTTG GTGGGAGAAA GTGGCTCGGG AAAATCCGTG ACAGCCAACG CGATTTTGCG TTTGTTGCCC AAAGGATCGG CGCACTATTT AAGTGGCAGC ATTCATTTTG GCGATGTAGA TACCCTGCGC TGCTCAGAGC GCGCGCTGCG CGGCATCCGC GGGGGACGCA TAGGGATGAT TTTTCAAGAG CCGATGGTCT CGCTTAATCC TCTGCACAAA ATTGGAAAAC AGTTGGTGGA AACCTTAGCG ATCCATCGAG GATTACGTGC AACGGCAGCA GAGCAAAAAG CGATTGAATG GCTTGGCAAG GTGGGGATTC GTCATCCTGA AATTAAGATC AATGCCTATC CGCATGAACT CTCAGGCGGT GAGCGGCAAC GTGTGATGAT TGCCATGGCG CTAATCAATG AACCCGAGCT ACTGATTGCC GATGAACCTA CCACAGCATT AGATGTTTCG GTACAAGCAC AGATTTTGGA TTTACTTAAA TCTCTGCAAC AAGAATTGGG CATGGCGATG TTGTTCATTA CCCATGATTT GAGCATAGTG CGCCGAATTG CTGACCGAGT GGCAGTGATG CAAAGTGGCC AATTGGTCGA AACTAACGCG TGCCACACTT TGTTTGCTGC GCCTGCACAT CCCTATACCC AGCAGTTGAT CAATGCCGAT CCGCGTGGTG TGCCCGTCCC TACAGCGATG GATGCTCCGA CGCTGCTGCA AGCGGAAAAG TTACGGGTGT GGTTTCCAAT CAAAGGCGGT TATTTTCGCC GCACTCAAGC CTATATAAAA GCGGTTACAG ATATGAGTTT CACCTTGGCC AAAGGGCAAT CGTTGGGTTT GGTGGGGGAA AGTGGTTCAG GGAAATCGAC CACGGGCATG GCGATTCTCA AGCTTCTCGC CTCACAAGGG GCTATCCGTT TTGCAGGGCA AGATCTGCAA GCTCTCAAAC GCCGTGAAAT GCTGCCGTAT CGCAGTAAAA TGCAGGTGGT GTTTCAAGAC CCATATTCTG CGCTTAATCC TCGAATGTCG GTGGCGCAAG TGATAGGCGA GGGTTTACGC GTGCATAGCC AGCTTAATGA TGACGAGATT GATCACGCGA TTTGCGCGGT GATGCAGGAA GTCGGCCTAG ATGTAGACAC TCGGCATCGC TATCCCAATG AATTTTCTGG TGGTCAACGG CAGCGTATCG CGATTGCGCG TGCGTTGGTG CTCAAGCCTG AGTTCATATT GCTTGATGAG CCAACCTCAT CGCTAGACCG AACTGTACAA GCGCAAGTAC TGGATTTGCT GAAAGATTTG CAGCAGAAAT ACCAATTAAC CTATCTGTTT ATTAGCCATG ATCTCGCGGT GATCCGCGCT TTATGTCACC ACACCATAGT GATGAAAGCG GGGGAGATTG TCGAACATGG CGAAACTCAA AGCCTATTTG AGAATCCAAG TCACCCGTAT ACGCAGCAGC TAGTGCGTCT TTCTCTGTTG TAA
|
Protein sequence | MNDWVLKIDN LSVGFGIAGQ ARPVTEGVSL TIARGETLAL VGESGSGKSV TANAILRLLP KGSAHYLSGS IHFGDVDTLR CSERALRGIR GGRIGMIFQE PMVSLNPLHK IGKQLVETLA IHRGLRATAA EQKAIEWLGK VGIRHPEIKI NAYPHELSGG ERQRVMIAMA LINEPELLIA DEPTTALDVS VQAQILDLLK SLQQELGMAM LFITHDLSIV RRIADRVAVM QSGQLVETNA CHTLFAAPAH PYTQQLINAD PRGVPVPTAM DAPTLLQAEK LRVWFPIKGG YFRRTQAYIK AVTDMSFTLA KGQSLGLVGE SGSGKSTTGM AILKLLASQG AIRFAGQDLQ ALKRREMLPY RSKMQVVFQD PYSALNPRMS VAQVIGEGLR VHSQLNDDEI DHAICAVMQE VGLDVDTRHR YPNEFSGGQR QRIAIARALV LKPEFILLDE PTSSLDRTVQ AQVLDLLKDL QQKYQLTYLF ISHDLAVIRA LCHHTIVMKA GEIVEHGETQ SLFENPSHPY TQQLVRLSLL
|
| |