Gene VC0395_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0530 
Symbol 
ID5135052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp584441 
End bp585037 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID640530852 
Producthypothetical protein 
Protein accessionYP_001215369 
Protein GI147671437 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA AATGCAACTT TGATCGCGAA GAGAAATTAC ACCAAGCAAT GACGCTGTTT 
TGGCAAAAAG GGTATGCCAA TACCGCGATA TCCGATTTGG TCGATCACTT ACAAATCAAT 
CGCTTTAGCC TTTACAACGC GTTTGGTGAT AAGCAAAAGC TCTATTATGA AGCGCTGGAT 
CGTTATCTGA ATTTGGTCAG TTCCCCTGCC CTTAAAGATC TCGAGCTCGA AAGTGCGGCG 
TGGCCAGAAT TGAAAGCGTT TTTGCAACAT TTTGCCGCGC TCCAACGCGA GGGAAACCGT 
GGTTGTTTTA TGCAAAATGC TTTGGTTGAG CATGCAGACA CGGACGATGA AGTCTTAAAC 
AAAGGTCACG CGTTATTTGA TCATCTGCTG CACCTGATCG CCCGTGCGCT CAACAATGCG 
ATACAACAAG GTCAAATTGC GGCTCATCTT TGTGCGGACT CTTTGGCGCC ATTAGTTTTG 
ACCCAGATGC AAGGTATGCG CGTGCTTGGC AAAGCGCAGC GCCATGCCAA TCTTGAGCAG 
GGATTAGAAG CCTTGATCCG TTTGATAGAG GGCGATTTTA CAGGGGCTAA AGCATGA
 
Protein sequence
MARKCNFDRE EKLHQAMTLF WQKGYANTAI SDLVDHLQIN RFSLYNAFGD KQKLYYEALD 
RYLNLVSSPA LKDLELESAA WPELKAFLQH FAALQREGNR GCFMQNALVE HADTDDEVLN 
KGHALFDHLL HLIARALNNA IQQGQIAAHL CADSLAPLVL TQMQGMRVLG KAQRHANLEQ 
GLEALIRLIE GDFTGAKA