Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0526 |
Symbol | |
ID | 5134573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 581579 |
End bp | 582061 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640530848 |
Product | hypothetical protein |
Protein accession | YP_001215365 |
Protein GI | 147671651 |
COG category | [S] Function unknown |
COG ID | [COG2501] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG AGCAATTCAA CCCGCAAGAT GAAGAAATCG AAATAGAAGC GATTGGTGTT GAGGTCTCTT GCCAGCCGAT TGAGCTGCAC AAAGTGTTAA AAATTGCCAA TGCCGTAAGT GGAGGTGGTG AAGCAAAACA CGTGATCAGT GAAGGCTATG TGTTTGTTAA TGGCGATGTA GAAACTCGCA AACGCTGCAA AGTGTTTGAT GGCGATCTGA TTGAATTTAA CCAAGAGTTT TATTTGGTGA TTTGTGATGC ACCAGTGACA GAGCCAGAGT CATTCGATAC TCAACCTGAG CTAGCATCGT CGCACAAGCC GACAAAAACG CAGAAGAAGT CTTCAGCCAA CACTTCGGCC AAATCCAAGC CATCAAAAAA CAACAAAACC GTATCTGGAC AAAAAAAAGC CAAGAACGAT AAAAAATCAC CACAAAGCGA CAGCAAATCC CCATCAGGGC GCAGTGCTAT CCGATTCTTT TGA
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Protein sequence | MTDEQFNPQD EEIEIEAIGV EVSCQPIELH KVLKIANAVS GGGEAKHVIS EGYVFVNGDV ETRKRCKVFD GDLIEFNQEF YLVICDAPVT EPESFDTQPE LASSHKPTKT QKKSSANTSA KSKPSKNNKT VSGQKKAKND KKSPQSDSKS PSGRSAIRFF
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