| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0520 |
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| Symbol | |
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| ID | 5134122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 576697 |
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| End bp | 577680 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640530842 |
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| Product | putative transposase |
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| Protein accession | YP_001215359 |
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| Protein GI | 147671805 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.693676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTATGG ACAGAGAAAT CCAACAAAGA CTACAGTGGG TAAAAATGTA TGAGGAATGT
GGTGATGCAG GCCTCGTATG TCGACGCTGT GGTATTTCCA GACCAACATT ACGAAAGTGG
GCTAAGCGAT ATAAGCAATG TGGAATCGCT GGTCTGGAAA GCCAGAGCAG ACGCCCTCAT
TCATCTCCAG ATACCAAACT CACTGATGAG CTAAGAGCAT TGATCCTTAC GATGCGTGAC
AAACGCAATT TAGGGGCGCG ACGTTTACAA ACGGAATTAA TCCGACTTCA CAAAATACAC
CTAAGCACAG CGACACTCCA TAAAGTTTTA TCCGAAGCAT CAGTCAAACC CATCGTAACT
TACCGACGCA AAAAAGATTT CCAAAGATAT GAGCGCCCAA TTCCTGGTGA TAGAGTCCAG
ATGGACACGT GTAAAATAGC GCCTGGAATT TACCAGTATA CAGCTATTGA TGATTGCTCT
CGCTATCGGG TTCTAAGGTG CTACTCTCGG CGCACAGCAG CAAATACAGT CGACTTTATC
GATTGTGTCG TGGAAGAGAT GCCATTTCCT ATCCAGCGTA TTCAGACGGA CAGAGGGCGT
GAATTCTTTG CTGAAAAAGT CCAGAAACAA CTCATGATTT ATGGGATCAA GTTTCGCCCA
AATAAGCCTG GCTCACCTCA CTTGAATGGC AAAGTGGAAC GCTCGCAGAA AACAGATAAA
AGTGAGTTCT ATCCGACCAT AGATGTCTCT GTGGGGCTGC AAGAACTGGA TCTGCTACTA
GCTGAATGGC AACACTACTA CAACTGGGAA CGGCCCCACA GCTCGTTAAA TGGGCTAACC
CCGATAGACA GGATTACTGA GATATCTGAT CAAACTCCTT TGTCTGAAGA GGTATCTCAG
AACTACCAGA TCAAGAAAGA GCGGTTTCAA GAGCAAAATT ACAAGCTCGA TCTTCAGCTA
AGAAAATTGA AACCATCTCT ATGA
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| Protein sequence | MSMDREIQQR LQWVKMYEEC GDAGLVCRRC GISRPTLRKW AKRYKQCGIA GLESQSRRPH
SSPDTKLTDE LRALILTMRD KRNLGARRLQ TELIRLHKIH LSTATLHKVL SEASVKPIVT
YRRKKDFQRY ERPIPGDRVQ MDTCKIAPGI YQYTAIDDCS RYRVLRCYSR RTAANTVDFI
DCVVEEMPFP IQRIQTDRGR EFFAEKVQKQ LMIYGIKFRP NKPGSPHLNG KVERSQKTDK
SEFYPTIDVS VGLQELDLLL AEWQHYYNWE RPHSSLNGLT PIDRITEISD QTPLSEEVSQ
NYQIKKERFQ EQNYKLDLQL RKLKPSL
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