Gene VC0395_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0488 
Symbol 
ID5133939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp545108 
End bp545662 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID640530811 
Productputative lipoprotein 
Protein accessionYP_001215329 
Protein GI147671979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.67481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGATTG ATATGAAGCA TAATGCACTA AAAATGGCGC TAATCGCAGT ATTGGGTGTC 
ACTTCCTTAA CTGGATGTAT GGGACAAATG GCAGCGACCG GACTGGTCAA TAAATTCAAT 
TTAGAAGTGG TGGATAACCG TTACGCCCGT GAAGGCCTGT TTTTGCTGCT TTCACCCGTC 
TATGGTTTAA CCAGTACTGC CGACCTGTTT ATTTTTAACT CGATTGAGTT CTGGACAGGT 
AAAAACCCAA TTTCAGGAAA GTCGCCAGCG GTTGTTGATA TTCCTGCCAA AGCGATTATC 
AAAGTCAATG GTCAATTGGA TCGCTCTTTG ACAGAAGCAC CACTGAAAGC ACAAGTGCGC 
CCGATCGAAA AAGCAACGCT AGAACAACTT GATTCGCATA CGCTTCAGAT GGAAGTGACC 
TATGTCGATG GCAGTCATAA AGTATTGCGT GGCGAAAAAG GTCAAGATGA GGTCACTTTT 
TATCTAGATG GTGAACTCTT TACCGTTGTT AGCCAGCAAG AGCTCAATGC TTATATCGAG 
GCAAGCCAAA TTTGA
 
Protein sequence
MEIDMKHNAL KMALIAVLGV TSLTGCMGQM AATGLVNKFN LEVVDNRYAR EGLFLLLSPV 
YGLTSTADLF IFNSIEFWTG KNPISGKSPA VVDIPAKAII KVNGQLDRSL TEAPLKAQVR 
PIEKATLEQL DSHTLQMEVT YVDGSHKVLR GEKGQDEVTF YLDGELFTVV SQQELNAYIE 
ASQI