Gene VC0395_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0486 
Symbol 
ID5134158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp543465 
End bp544697 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content49% 
IMG OID640530809 
Productoxalate/formate antiporter 
Protein accessionYP_001215327 
Protein GI147672202 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.65082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA TTGATAAAGC TATGCGCATT CTGCTGGCGG GTTTCTGTAT CAACCTTTGT 
CTTGGCATTC TTTATGCCTG GAGCGTTTTT AATAAAGCCC TAGTTACCGA CTTTGGCTGG
AGTGCAGCGG ATGCCTCTTC CCCTTATGCT ATTGCAACCA TCGCTTTTTC TGTCTGTCTT
TTAGTTGCTG GCATTCTGCA AGACCGCATG GGTCCACGTA ATATCCTGAT TTTAGGTACC
ACCTTAACGG GTTTAGGCAT GATTGCCTCA GGTTTTGCTT CTTCTGTTTT GATGCTCAAT
CTCACCTTCG GCGTGATGAC GGGTGCAGGT ATCGGTTTTG GCTATGCTTG CCTCTCCCCG
TCCGCTATGA AGTGGTTCCA CCCAAGTAAA AAAGGCATGG TAAATGGCCT GATTGCAGCG
GGTTTTGGTC TGGCAGCGAT TTATCTTGCG CCACTGACAT CAGCCTTGAT TACTCATTTA
GGCATTCAAA CCAGCTTTAT GATTCTGGGC GCGGGTGTAC TGGCGATTGC GGTACCGCTC
GCCTGTACGA TTAACAACCC ACCAGCGGGT TATGTGCCTG CTGAGCCGAA ACTGAAAGCC
GGTCAAGAAG CAAAAGTAGT CGCCAAAGTC GCCAACTTAA GCTGGAAAGC CATACTGAAA
ACACCTCAGT TTTATGCATT GTGGCTGATG TATGCTCTTG CCGCTTCTGT TGGTTTGATG
ATCATCGGTA ACATCACGAA CATCGCTAGC GTGCAAGCAA ACCTACCAAA CGCGGTATAC
CTTGCTTCAA TCTTGGCGAT TTTCAACTCA GGCGGTCGCA TTGCTGCGGG TATCTTGTCA
GATAAAATTG GTGGCGTGCG TACTCTACTG CTGGCATTTT TGCTGCAAGG TGGAAACATG
GTGTTGTTCG CCACGTTTGA CTCAGAATTT ACCTTAATCA TCGGCACGGC GATTGCCGCC
GTCGGTTACG GTACGCTACT GGCGGTGTTC CCATCGATCA CGGCAGAATT CTATGGCTTG
AAGAATTACG GCACCAACTA TGGCGTACTC TACACTTCAT GGGGCATTGG TGGCGCGATT
GGTGCTGCAG TCGTGGGTTA CTCAATGACT CATGGTGGCG GCTACAACTT GGCATACACC
ATTTCCGCAG CAATGATGGC CGTGTGTATC CTGCTTGCTC TGATCACCAA GCCTATTTCA
GCGGAGAAAG TGGCTCAGTT GCAAACCGCC TAA
 
Protein sequence
MSKIDKAMRI LLAGFCINLC LGILYAWSVF NKALVTDFGW SAADASSPYA IATIAFSVCL 
LVAGILQDRM GPRNILILGT TLTGLGMIAS GFASSVLMLN LTFGVMTGAG IGFGYACLSP
SAMKWFHPSK KGMVNGLIAA GFGLAAIYLA PLTSALITHL GIQTSFMILG AGVLAIAVPL
ACTINNPPAG YVPAEPKLKA GQEAKVVAKV ANLSWKAILK TPQFYALWLM YALAASVGLM
IIGNITNIAS VQANLPNAVY LASILAIFNS GGRIAAGILS DKIGGVRTLL LAFLLQGGNM
VLFATFDSEF TLIIGTAIAA VGYGTLLAVF PSITAEFYGL KNYGTNYGVL YTSWGIGGAI
GAAVVGYSMT HGGGYNLAYT ISAAMMAVCI LLALITKPIS AEKVAQLQTA