Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0486 |
Symbol | |
ID | 5134158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 543465 |
End bp | 544697 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530809 |
Product | oxalate/formate antiporter |
Protein accession | YP_001215327 |
Protein GI | 147672202 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.65082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA TTGATAAAGC TATGCGCATT CTGCTGGCGG GTTTCTGTAT CAACCTTTGT CTTGGCATTC TTTATGCCTG GAGCGTTTTT AATAAAGCCC TAGTTACCGA CTTTGGCTGG AGTGCAGCGG ATGCCTCTTC CCCTTATGCT ATTGCAACCA TCGCTTTTTC TGTCTGTCTT TTAGTTGCTG GCATTCTGCA AGACCGCATG GGTCCACGTA ATATCCTGAT TTTAGGTACC ACCTTAACGG GTTTAGGCAT GATTGCCTCA GGTTTTGCTT CTTCTGTTTT GATGCTCAAT CTCACCTTCG GCGTGATGAC GGGTGCAGGT ATCGGTTTTG GCTATGCTTG CCTCTCCCCG TCCGCTATGA AGTGGTTCCA CCCAAGTAAA AAAGGCATGG TAAATGGCCT GATTGCAGCG GGTTTTGGTC TGGCAGCGAT TTATCTTGCG CCACTGACAT CAGCCTTGAT TACTCATTTA GGCATTCAAA CCAGCTTTAT GATTCTGGGC GCGGGTGTAC TGGCGATTGC GGTACCGCTC GCCTGTACGA TTAACAACCC ACCAGCGGGT TATGTGCCTG CTGAGCCGAA ACTGAAAGCC GGTCAAGAAG CAAAAGTAGT CGCCAAAGTC GCCAACTTAA GCTGGAAAGC CATACTGAAA ACACCTCAGT TTTATGCATT GTGGCTGATG TATGCTCTTG CCGCTTCTGT TGGTTTGATG ATCATCGGTA ACATCACGAA CATCGCTAGC GTGCAAGCAA ACCTACCAAA CGCGGTATAC CTTGCTTCAA TCTTGGCGAT TTTCAACTCA GGCGGTCGCA TTGCTGCGGG TATCTTGTCA GATAAAATTG GTGGCGTGCG TACTCTACTG CTGGCATTTT TGCTGCAAGG TGGAAACATG GTGTTGTTCG CCACGTTTGA CTCAGAATTT ACCTTAATCA TCGGCACGGC GATTGCCGCC GTCGGTTACG GTACGCTACT GGCGGTGTTC CCATCGATCA CGGCAGAATT CTATGGCTTG AAGAATTACG GCACCAACTA TGGCGTACTC TACACTTCAT GGGGCATTGG TGGCGCGATT GGTGCTGCAG TCGTGGGTTA CTCAATGACT CATGGTGGCG GCTACAACTT GGCATACACC ATTTCCGCAG CAATGATGGC CGTGTGTATC CTGCTTGCTC TGATCACCAA GCCTATTTCA GCGGAGAAAG TGGCTCAGTT GCAAACCGCC TAA
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Protein sequence | MSKIDKAMRI LLAGFCINLC LGILYAWSVF NKALVTDFGW SAADASSPYA IATIAFSVCL LVAGILQDRM GPRNILILGT TLTGLGMIAS GFASSVLMLN LTFGVMTGAG IGFGYACLSP SAMKWFHPSK KGMVNGLIAA GFGLAAIYLA PLTSALITHL GIQTSFMILG AGVLAIAVPL ACTINNPPAG YVPAEPKLKA GQEAKVVAKV ANLSWKAILK TPQFYALWLM YALAASVGLM IIGNITNIAS VQANLPNAVY LASILAIFNS GGRIAAGILS DKIGGVRTLL LAFLLQGGNM VLFATFDSEF TLIIGTAIAA VGYGTLLAVF PSITAEFYGL KNYGTNYGVL YTSWGIGGAI GAAVVGYSMT HGGGYNLAYT ISAAMMAVCI LLALITKPIS AEKVAQLQTA
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