| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0485 |
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| Symbol | |
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| ID | 5133993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 540754 |
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| End bp | 543054 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530808 |
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| Product | fatty acid cis/trans isomerase |
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| Protein accession | YP_001215326 |
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| Protein GI | 147671585 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0799567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGCAG GCATCAACTA TGATCAGCTC TTTGGCACAG AGCAGGTACG TGAGCGACAA
TTGCCTTTGC ACTCTAGCCA AGCTCAGCAT TTTTTAAACG AAGTAAAACC CATCTTAGAT
AACCGATGTG TCGTCTGTCA CGCCTGTTAC GATGCCCCCT GTCAGCTCAA AATGACCTCG
GCTGAAGGCA TTGATCGCGG GGCGAGCAAA GCGTTGGTTT ATCAGGGAAC TCGGCTGACG
GCCGCTACTC CAACTCGTCT CTACGAAGAT GCTCAGTTAA CCCAAGAATG GCGAGCTGCT
GGTTTTCATC CCGTGCTGAA TGAGCGAGAT CAAACCGCGC AAGCCAATCT TGATGCTGGG
GTGATGGCAC GTTTGCTGAT GCAGAAAGAG CGTCATCCAC TACCACAGCA AGATCAGTTA
CAAGGATTTG ATTTTTCAAT TGATCGTGAG CAAACCTGCC CAACGATCAA CGAAATGGAT
CACTTCGAAC AAGTGAATCC TAATTGGGGA ATGCCCTTTG GTATGCCGAA TTTATCCCCC
AAGGAGTACG CTACCCTGCT CTCTTGGCTA CAAGAGGGAG CAGTGATGAA TCAAGCGCTC
CCGCTGAGTG CGCAAGAACA AGCTTTGGTT ACGGAATACG AAGCCTTGTT GAATCACAGC
TCGCGTAAAA ATCAGCTCGC AGCACGCTAT ATCTACGAGC ATCTATTCCT CTCACATCTG
TACTTTTCAG AAATAGCGCA GGAGCGGCCT CGTTTCTTTA AACTCATCCG CTCCAGTACT
CCACCGGGTG AGCCTGTAAA GCGAATCGTG ACGCGTCGTC CGTACGATGA TTCGGGCGTT
GAGCGAGTCT ATTATCGCCT TGTGCCAGAA CAAGAGACGA TTGTCGATAA AACCCACATG
CCTTTCGCAC TCCACAAACA ACGGATTGCG AACTGGAAAC TCTGGTTTAT TGATGCGGAT
TATGAGGTTG CCGAGCTTCC AAGTTATCGT CCGGATATTG CCGCAAACCC GATGTCCGCG
TTCATCGACC TTCCCGTTAA AGCGCGCTTT AAGTTTTTGC TCGATAATGC GCAAAATACG
GTGATGGCCT TTATCAAAGG CCCAGTGTGT CGAGGCCAGT TGGCGCTGAA TGTGATTAAC
GATAGATTCT GGGTCTTCTT CCTCGATCCT GAGAAAGCCG ATCTTCCAGA AGTCAACGAA
TTCTATCGCT CACAAGTCGA CAATTTGAAG CTACCGGCTG AACAAGAGAA TACGGCACTG
CCGCTGAGTA ACTGGGTACG TTATTCGCTA CAACAAAGCC GTTATCTCGA AGCAAAATCT
GAATTTATTA ATCAATGGTT TAAAAATGGT ACGCACCTTA CCACGGACAT TATTTGGGAT
GGAGCGGGCA CAAACCCTAA TGCCGCATTA ACGATTTTCC GCCATTTCGA TAGCGCATCT
GTCGTGCAAG GATTGGTGGG TGAGCCTCCC AAAACCGCTT GGATAATGGA TTATGCGCTG
CTTGAGCGCA TTCATTATCT GCTTGTTGCT GGTTTTGATG TATATGGCAA TTTCGGACAT
CAGTTGATTA CTCGTATGTT CATGGATTTT CTGCGCATGG AGGGTGAGAG TAATTTTGTT
GCCCTGCTAC CACGCGATAT GCGCCATCAG GAGTTATCTA GTTGGTACCA AAATCAAAGT
GTACAGTTTT CCGATTTCTT GCAACGTAAC GTAAAACCCT TTGATCAGCC AACCAGCGTT
AACTATGTGA CTGATAACCC GAAACAGGAG CTGTTTGCTA AACTCCGCAA GCAAGTACAG
TCGGTATTGA GTGATCGATA CGTGATAACT CAAACGGGAT TCAAAGCCGA ACATGAGTTT
GCTTTGCGCC AGATAGATCA TCTGCGTGGT GAAGGTTTGC TGCCCATTCC ACAATTGATG
ATGTTGATGA TTGAAAGTGA ACAAGGTAAA CCGCAACTGT TTACTCTCAT TCACAACAAT
GCCCACACCA ATATCTCGAG CTTGTTTGAT GAACAGAACA ACCGCGACCC CAAAAATGAT
AATTTGACTT TAGTGCGCGG AGTGGTCGGC AGTTATCCAT CGGCGTACTT AACACTGAAA
GAAAACCAGA TCCCGGAGCT GTATCAACGC CTAGTGGCGA TGAAGTCAGA GCAAGATTAT
GTCGCCCTAT TGGATCGTTT TGCAGTACGC CGCAGCTCAC CCGAATTTTG GGCATTTAGC
GATCTTGTGC ATCAATGGTA TCGCCAAGAT CAACCCATTG AGTTTGGTTT GCTCGATTAC
AACCGTTTCG AAAACCGTTG A
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| Protein sequence | MYAGINYDQL FGTEQVRERQ LPLHSSQAQH FLNEVKPILD NRCVVCHACY DAPCQLKMTS
AEGIDRGASK ALVYQGTRLT AATPTRLYED AQLTQEWRAA GFHPVLNERD QTAQANLDAG
VMARLLMQKE RHPLPQQDQL QGFDFSIDRE QTCPTINEMD HFEQVNPNWG MPFGMPNLSP
KEYATLLSWL QEGAVMNQAL PLSAQEQALV TEYEALLNHS SRKNQLAARY IYEHLFLSHL
YFSEIAQERP RFFKLIRSST PPGEPVKRIV TRRPYDDSGV ERVYYRLVPE QETIVDKTHM
PFALHKQRIA NWKLWFIDAD YEVAELPSYR PDIAANPMSA FIDLPVKARF KFLLDNAQNT
VMAFIKGPVC RGQLALNVIN DRFWVFFLDP EKADLPEVNE FYRSQVDNLK LPAEQENTAL
PLSNWVRYSL QQSRYLEAKS EFINQWFKNG THLTTDIIWD GAGTNPNAAL TIFRHFDSAS
VVQGLVGEPP KTAWIMDYAL LERIHYLLVA GFDVYGNFGH QLITRMFMDF LRMEGESNFV
ALLPRDMRHQ ELSSWYQNQS VQFSDFLQRN VKPFDQPTSV NYVTDNPKQE LFAKLRKQVQ
SVLSDRYVIT QTGFKAEHEF ALRQIDHLRG EGLLPIPQLM MLMIESEQGK PQLFTLIHNN
AHTNISSLFD EQNNRDPKND NLTLVRGVVG SYPSAYLTLK ENQIPELYQR LVAMKSEQDY
VALLDRFAVR RSSPEFWAFS DLVHQWYRQD QPIEFGLLDY NRFENR
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