Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0479 |
Symbol | |
ID | 5134757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 536856 |
End bp | 537812 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530802 |
Product | hypothetical protein |
Protein accession | YP_001215320 |
Protein GI | 147672368 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000001102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCAA TCACTTATCT TGGCTTTGGC CTACTTACCT TAACTCTTGT AGCCGTTGAT CTCTGGCAAA CCCGTAGTGG GAATGTCACG ATCAAAAAAG CGGCCATCTG GAGCATCGTC TGGTTTCTTC TCGCGTTTGT CTTTGCGATT AGCCTTTATT ACGGCTGGCA ATGGTACGCC CCTCACAGCA GCTACAGTGC CGAGAAAGCC ACTCTTTCTT TTATTACCGG CTATTTGCTC GAAAAGTCGT TAAGTGTCGA TAACTTGTTC GTGTTTGCGA TTATTTTTCA TCAATATTCA GTGCCAGAGC ACTTACGCCC ACGAGCTTTA CTTTGGGGGG TGATCGGCGC GCTGGTTTTA CGTGCGATCA TGATTGCCGT GGGGGCGCAG CTGCTCAGTC AATATCACTG GATCTTATAC GTGTTTGCTC TGTTTCTGAT TTGGACAGGG ATCCAATTGG CGCGCGATAA AGGTGAAGGG TCGATTAACC CACTGCCTGA ACGTTTGATT CGTCGTTGCT TCAATGTGAC GAAAGAGTAT CAAGGCAATG CATTGATCTG TAAGCAGCAA GGGCAGTGGT GGGTAACTCC GATGTTTATT GTGATTGGCG TCATTGCGTT TATGGATGTG ATGTTTGCTT TAGATTCGAT TCCTGCGATT TTTGCCGTGA CCCAAGAGCC ATTTTTAGTG CTGGCAGCGA ACGTGTTTGC TTTATTGGGG CTGCGCTCTC TGTATTTTGT ACTTCAAGGC ATGATGGATA AATTTTTCTA TCTTAAACCG GCTTTGGCTT TCATTATGAT GTTTATCGGG GTGAAGATGA TGTTAGTTGA TTCAGCTTGG GCAATTCCAA CGCCGATCTC ACTCTGCGTG CTACTGGTGA CCATGAGCAC GGCGGTGATC GCGTCTGTAC TCCGTGAGCG TTCTCAATCC AAACCCATCG CAGAGAAAGT CTCTTAA
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Protein sequence | MSPITYLGFG LLTLTLVAVD LWQTRSGNVT IKKAAIWSIV WFLLAFVFAI SLYYGWQWYA PHSSYSAEKA TLSFITGYLL EKSLSVDNLF VFAIIFHQYS VPEHLRPRAL LWGVIGALVL RAIMIAVGAQ LLSQYHWILY VFALFLIWTG IQLARDKGEG SINPLPERLI RRCFNVTKEY QGNALICKQQ GQWWVTPMFI VIGVIAFMDV MFALDSIPAI FAVTQEPFLV LAANVFALLG LRSLYFVLQG MMDKFFYLKP ALAFIMMFIG VKMMLVDSAW AIPTPISLCV LLVTMSTAVI ASVLRERSQS KPIAEKVS
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