Gene VC0395_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0479 
Symbol 
ID5134757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp536856 
End bp537812 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content47% 
IMG OID640530802 
Producthypothetical protein 
Protein accessionYP_001215320 
Protein GI147672368 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000001102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCAA TCACTTATCT TGGCTTTGGC CTACTTACCT TAACTCTTGT AGCCGTTGAT 
CTCTGGCAAA CCCGTAGTGG GAATGTCACG ATCAAAAAAG CGGCCATCTG GAGCATCGTC
TGGTTTCTTC TCGCGTTTGT CTTTGCGATT AGCCTTTATT ACGGCTGGCA ATGGTACGCC
CCTCACAGCA GCTACAGTGC CGAGAAAGCC ACTCTTTCTT TTATTACCGG CTATTTGCTC
GAAAAGTCGT TAAGTGTCGA TAACTTGTTC GTGTTTGCGA TTATTTTTCA TCAATATTCA
GTGCCAGAGC ACTTACGCCC ACGAGCTTTA CTTTGGGGGG TGATCGGCGC GCTGGTTTTA
CGTGCGATCA TGATTGCCGT GGGGGCGCAG CTGCTCAGTC AATATCACTG GATCTTATAC
GTGTTTGCTC TGTTTCTGAT TTGGACAGGG ATCCAATTGG CGCGCGATAA AGGTGAAGGG
TCGATTAACC CACTGCCTGA ACGTTTGATT CGTCGTTGCT TCAATGTGAC GAAAGAGTAT
CAAGGCAATG CATTGATCTG TAAGCAGCAA GGGCAGTGGT GGGTAACTCC GATGTTTATT
GTGATTGGCG TCATTGCGTT TATGGATGTG ATGTTTGCTT TAGATTCGAT TCCTGCGATT
TTTGCCGTGA CCCAAGAGCC ATTTTTAGTG CTGGCAGCGA ACGTGTTTGC TTTATTGGGG
CTGCGCTCTC TGTATTTTGT ACTTCAAGGC ATGATGGATA AATTTTTCTA TCTTAAACCG
GCTTTGGCTT TCATTATGAT GTTTATCGGG GTGAAGATGA TGTTAGTTGA TTCAGCTTGG
GCAATTCCAA CGCCGATCTC ACTCTGCGTG CTACTGGTGA CCATGAGCAC GGCGGTGATC
GCGTCTGTAC TCCGTGAGCG TTCTCAATCC AAACCCATCG CAGAGAAAGT CTCTTAA
 
Protein sequence
MSPITYLGFG LLTLTLVAVD LWQTRSGNVT IKKAAIWSIV WFLLAFVFAI SLYYGWQWYA 
PHSSYSAEKA TLSFITGYLL EKSLSVDNLF VFAIIFHQYS VPEHLRPRAL LWGVIGALVL
RAIMIAVGAQ LLSQYHWILY VFALFLIWTG IQLARDKGEG SINPLPERLI RRCFNVTKEY
QGNALICKQQ GQWWVTPMFI VIGVIAFMDV MFALDSIPAI FAVTQEPFLV LAANVFALLG
LRSLYFVLQG MMDKFFYLKP ALAFIMMFIG VKMMLVDSAW AIPTPISLCV LLVTMSTAVI
ASVLRERSQS KPIAEKVS