Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0478 |
Symbol | |
ID | 5134001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 534555 |
End bp | 536297 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530801 |
Product | putative 5`-nucleotidase |
Protein accession | YP_001215319 |
Protein GI | 147671895 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000584896 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATGA GAAGAAAAAA TCAGCCAGCG TCGATCACGC TGGCACACAT TAATGACACC CATTCCTACT TTGAACCTAC CTCGTTACAA CTGACGCTGG AACATGATGC GGACATTTTA AAACCCTTTG TCAGTGCTGG GGGCTTTGCT CGAATTGCAA CCCGTATTGC TCAATTACGC GATGATGCGC AGCGCATGCA GCGCGAATTT CTGTTTTTAC ATGCGGGAGA CTGTTTCCAA GGAACACTCT ACTTTTCGCT GTTCAAAGGT AAAGCGAATG CCGACATGCT CAATGCACTC AAGTTAGACG CAATGGCCAT CGGTAATCAT GAATTGGATA TGGGAAATTA TCCTGTTGCT CAATTCGCGC AGCGCATTCA ATTTCCTTTG TTGGCGGGCA ACTGGGATTT ATCACAAGAA CGAGACAGCA AATCGCTGCG TTTGGGGAGC AACCCTAAAG TCTACAGTTA TGATGCGCTT CAGGGCCATG CACGCTGGAT TGAGAAAAAG GCGCAGGGTG AAAGAATTGC TATCTTTGGC CTGTCGATTG ATAAGATGGC CGATATTGCC ACCCCAGACA GTGATACTCC GTTTGTGAAC GCCATCGAGA CGGCACGAAA GACGATTGCG GCAATCCACC AACACGGCAT CAATAAGATC ATTTTGCTGA GTCACTTAGG CTATGACGGT GACATTGCAT TAGCGGAACA AGTGTCTGGG ATCAGTGTGA TTGTGGGGGG GCATAGCCAT GTACTACAAG GTGATTTCTC AGCCCTTGGA CTCGGCAGTC AAGATGAATA TGGCTTAAAA ATCAATCACA CCTATATCGT TCAAGCTGGA TTTTACGCGC TTACTCTTGG CCATTGTCAG ATTGATTTTG CCGCCAATGG TGAGGTGACC CGATTTGAAG GGCGGAATGA GCTACTGCTC GGGCGTCGGA TGTTTGTTGA TGCCAGCATG AGCCAAGAGC AGATCAGTGA GCGTTATAGT CAAGCGCGTG ATGAAGTGGA TAACCATCCG AATGTGGTGG TGTGTAAAAA AGATCCTGTG GTGCAAAGTC TATTGCAGGA GAAATACATA CCCCAAGTAC GTCAACTGCA ACAACAAATT ATCGCTCATG CGGATCGCAC TTTACGCCAT TTGCGCATAC CGGATGCTGA AGGTGGCAGT GAGATTGCCC CTCTGGTCGC GAAAGCATTT GTGTATGCAT TGAATAAGCG TGGGCTAGAC GTTCAGTTTG CTATCCATAA TGCGGGTGGT GTCCGTACGT CAATTTTGCC GGGTAGCATC TCAGTTGCCG ATGTGGCAGG AAAGCTTTTG CCATTTGCCG TGCCGATCGG CGTTTACCAA GTGAAAGGGG AAGTGATCGC ACGCGCTCTG GAAGGTGCGA TCAATAACGC GCTCAGTAAT GGCGTGCAAG GAACAGGCTC AGGCAGCTAT CCATATTGCC ATCACCTGCG TTATCAATAC TTAGCGGATA AGCCCATAGG TCATCGCATT ACACAACTGC AGATCCAATT AGAGGGTGAG TGGCAAGCGG TGGATTCTGA AGCTTTGTAC TGGGGAACCT CTTCCGCTTA TACCATGAAA GGCAAAGAAG GCTATGATGC GCTGCTTGAT ATGGAAGGAG AGGGCATGGT GACACAGGTT TCTATGGCCG ATGCCTTTAT TGAGCTGCTG TCGGACTGCC CCTCCTTGCT CTCTTTTGAA GCGCATGATG CTTGTGAATG CCACCATCAT TAA
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Protein sequence | MPMRRKNQPA SITLAHINDT HSYFEPTSLQ LTLEHDADIL KPFVSAGGFA RIATRIAQLR DDAQRMQREF LFLHAGDCFQ GTLYFSLFKG KANADMLNAL KLDAMAIGNH ELDMGNYPVA QFAQRIQFPL LAGNWDLSQE RDSKSLRLGS NPKVYSYDAL QGHARWIEKK AQGERIAIFG LSIDKMADIA TPDSDTPFVN AIETARKTIA AIHQHGINKI ILLSHLGYDG DIALAEQVSG ISVIVGGHSH VLQGDFSALG LGSQDEYGLK INHTYIVQAG FYALTLGHCQ IDFAANGEVT RFEGRNELLL GRRMFVDASM SQEQISERYS QARDEVDNHP NVVVCKKDPV VQSLLQEKYI PQVRQLQQQI IAHADRTLRH LRIPDAEGGS EIAPLVAKAF VYALNKRGLD VQFAIHNAGG VRTSILPGSI SVADVAGKLL PFAVPIGVYQ VKGEVIARAL EGAINNALSN GVQGTGSGSY PYCHHLRYQY LADKPIGHRI TQLQIQLEGE WQAVDSEALY WGTSSAYTMK GKEGYDALLD MEGEGMVTQV SMADAFIELL SDCPSLLSFE AHDACECHHH
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