| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0474 |
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| Symbol | |
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| ID | 5134297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 529190 |
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| End bp | 530641 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530797 |
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| Product | putative formate transporter 1 |
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| Protein accession | YP_001215315 |
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| Protein GI | 147671415 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0517] FOG: CBS domain
[COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000188118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAG CCTACTCTAA AAATCAAAAC TGCTTTTCAC CCACGGAAAT GATGGCAGAA
GCAGAAAAGT TCGCACTGAG TAAAGCGAAA AAAACCAGCG GCATGATCTT AGGTCTTTCG
GTTATGGCGG GCGCTTTTAT CGGTTTGGCT TTTCTGTTCT ACATTACCGT CACCACAGGC
AGCGCTTCTG CCGGCTGGGG ATTGAGCCGA CTGGCGGGTG GTGTAGCGTT CAGTATGGGG
CTGATTTTGA TCGTCATCTG CGGTGGCGAG TTGTTCACAA GCTCTGTGCT ATCTAGCATC
TCATGGGCAA ATCGCGAAAT CAGTTTTGGA AAAATGCTCT CTATCTGGGG CAAGGTGTAC
GTCGGTAACT TTATCGGTGC CATTTTTCTA CTGCTTTTGG TGACAGCGGC TGGCCTTTAC
CAGCTTGATG AAGGCCAATG GGGTTTAAAT GCCCTCAATA TTGCGCAGCA CAAACTTCAT
CACACCACAG TACAAGCTTT TGCTTTAGGC ATTCTATGTA ACCTACTGGT TTGTTTGGCT
ATTTGGCTGA CCTTCAGTTC AGCGAATGCT ATGACTAAAG CGGCCATGAC CATCATGCCT
GTCGCGATGT TTGTTTCTAG CGGCTTTGAG CACTGTGTGG CCAATATGTT CATGGTTCCA
CTGGGTATTG TTATTCAAAA CTTCGCACCA GACAGTTTCT GGCAACAGGT TGGTGTGACA
GCCAGCCAAT ACAGCGATTT GAATGTCACT CAATTTATTA CGGCGAACTT AATACCGGTC
ACGCTCGGCA ACATTGTGGG TGGTGCCGTG CTGGTTGGCC TCGCCAACTG GAGCATTTAC
CGCCGCCCTC AGTTAAAAGC CGCCAATGTT GTCACGATTA CGGAAACTCA AGCACTTACG
TCAGTCAAGG AAACTCTTAT GAAAAGCACA ATTACAGTAA AAGATATGAT GAACACTCAA
CCTGTTACCC TCAGCGTTGA GATGACCACT CCAGCCGCGA TCGACACCCT ACTCGACCAC
CATTTGTCCG CTGCTCCAGT TGTCGATATG CAAGGTCGCT TGGTTGGTGT GCTCTCTAGT
CACGATGTAA TGGTTGATCT CTGGTGCCAA GACTACTTGC CAAGCCAAGA CCAAAAAGTG
GTAGATCTGA TGACTCGTGA TGTGATTGCG ATTGATATCA ACGACAAGCT GGTGGATGTT
GCGGAGTTCT TCTGTATCGA TAAAGAACAG CTATTCCCAA CCACAAGCAT GGGCATTGCC
ACTCGCTTCA ACGCTCTCTC ATTAGAAGAA CGCGCCAAAA GCATCAAGGT AAACAAACCA
CATATGCTGC CTGTTCTACA CAATGGTCAG TTAGTGGGAG TACTGGAGCG TAATGATGTG
CTTGAAGCGC TGCGCCCAAT TTATGGTGAA CGGGTAAGAA TTGTCAAAGA TAAAGCGTTG
GCTCGCGCTT AA
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| Protein sequence | MSAAYSKNQN CFSPTEMMAE AEKFALSKAK KTSGMILGLS VMAGAFIGLA FLFYITVTTG
SASAGWGLSR LAGGVAFSMG LILIVICGGE LFTSSVLSSI SWANREISFG KMLSIWGKVY
VGNFIGAIFL LLLVTAAGLY QLDEGQWGLN ALNIAQHKLH HTTVQAFALG ILCNLLVCLA
IWLTFSSANA MTKAAMTIMP VAMFVSSGFE HCVANMFMVP LGIVIQNFAP DSFWQQVGVT
ASQYSDLNVT QFITANLIPV TLGNIVGGAV LVGLANWSIY RRPQLKAANV VTITETQALT
SVKETLMKST ITVKDMMNTQ PVTLSVEMTT PAAIDTLLDH HLSAAPVVDM QGRLVGVLSS
HDVMVDLWCQ DYLPSQDQKV VDLMTRDVIA IDINDKLVDV AEFFCIDKEQ LFPTTSMGIA
TRFNALSLEE RAKSIKVNKP HMLPVLHNGQ LVGVLERNDV LEALRPIYGE RVRIVKDKAL
ARA
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